Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01029 ATGGAGTTTCTGGATACCAGAAAACTACAGTTACAACAACAACAACTGCAACAACAGCCACAACATTTTCATGTGTTGGCAGTGGACGACAGTGTCATAGATAGGAAGCTTTTGGAGAGGCTCCTTAGAGGTTCTTCATGCAAAGCAGTTACCTGCGTGGACTCTGGAGACAAGGCTTTGAAATATCTTGGGCTAATTGATGAGCTTGATGATACTTCTTCAACCACTTTAGAATCAGAATCTTCTCATCCTCCACCTCAACCATTACAGCAAGAGGGAATCAAAGTGAATTtgatcatgacagactattgcatgcctgggatgagtggctatgatttactcaaacgagtcaagGGATCTTCTTGGAAAGATGTTCCAGTCGTGATTATGTCATCAGAAAATGTACCTTCCAGAATCAGCATGTGCTTAGAAGAAGGGGCACAAGAGTTTCTATTGAAGCCTCTTCAGTTATCGGATTTGGATAAGCTTCAGCCGTACTTTCTGAAATCGCTTGACAATTCTTGTGAAAAAGAATCTGCTAACAGTTCCATAGATTCAAACAATGACAATGTCATCAACAACAACAGCAATAACAGTAACAATAACAACAATAATAATATTAGCAAAAGGAAGGCCATGTCTCCTGAGCCTCATCAGGAGGAGAGATCAAGACCCAAAATGAAAGAGTTAGCGGTGGTGTAA 702 0.3689 MEFLDTRKLQLQQQQLQQQPQHFHVLAVDDSVIDRKLLERLLRGSSCKAVTCVDSGDKALKYLGLIDELDDTSSTTLESESSHPPPQPLQQEGIKVNLIMTDYCMPGMSGYDLLKRVKGSSWKDVPVVIMSSENVPSRISMCLEEGAQEFLLKPLQLSDLDKLQPYFLKSLDNSCEKESANSSIDSNNDNVINNNSNNSNNNNNNNISKRKAMSPEPHQEERSRPKMKELAVV 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01029 233 Pfam Response regulator receiver domain 95 161 IPR001789 GO:0000160
Gma06g01029 233 Gene3D - 24 228 - -
Gma06g01029 233 SUPERFAMILY CheY-like 22 162 IPR011006 -
Gma06g01029 233 MobiDBLite consensus disorder prediction 213 233 - -
Gma06g01029 233 SMART REC_2 23 164 IPR001789 GO:0000160
Gma06g01029 233 MobiDBLite consensus disorder prediction 178 233 - -
Gma06g01029 233 CDD REC_typeA_ARR 25 163 - -
Gma06g01029 233 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 232 IPR045279 GO:0009736
Gma06g01029 233 PANTHER TWO-COMPONENT RESPONSE REGULATOR ORR4 9 232 - -
Gma06g01029 233 ProSiteProfiles Response regulatory domain profile. 24 168 IPR001789 GO:0000160
Gma06g01029 233 MobiDBLite consensus disorder prediction 178 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01029 Gma-Chr6 9615408 9618594 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01029 22 170 Response Regulator Gene Family AT3G57040 59.333 2.69e-58 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma06g01029 Response_reg 1.7e-13 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01029 K14492 - gmx:100786187 381.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02367 04 54069006 54072527 Gma06g01029 06 9615408 9618594 GST