Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01009 ATGGACGCCACCGTCACTCAGCTCAGTCCCTCCTGCAATGCAGCCGAGCCGCCGCGCCGCATTGTTCGCCGGCGGCTGGTCCAGACGACGCTCTTTCCTCACAAGCCACCAGAGCCCGTCGAAAAGAACGACAAAGAGGACGAACGCCATGAGGATTACTCCGACGCTGAGAATCACAAGAAGAGGAAGAAGCCCAAGGCTAAAACCACTCCTCGAAAAAAAGCTTCCAAGCAGAATGCCACGCCAAAGAAAAATGCATCGGCTAATGGGACTAACAAGGGTTCAACTTCGCGGCAGGTGTTGGCTGATTACGATCCGGTTAATGCAACGGAGCATGATTTGTTTTTAGAAGCGAAATTGGCTGCTGAGGAAGATTCGAGGATATTTGCAGGACGGCAGATACATCCATTTTTTTCACTGTGGAAGGCGGGGAAGAAAGTTCAGGACATGGCTGATTCAGGAAGTAATTTATCGACAACAAAGAGTGAGGAAGAAAGGACTACCTGTGGTCCTATTCATGTATTTGAAAATACTCAGGATGATACCCCATCCCTTGACTGGAGAAACTGGGCGTTTTTGGAGAATACTACCACTATGAATTATGGTCCAGAAATTTTAAATTCATCTGTTTTGGAGGGTTCTGTTGAATCCTTGAATTTTGATAAGCTTCGTAGTTCCTTGGATCCATCAGGTGTTTCAATTTCTCAGAATGCCTTATCTTCAGATAGACTTTGTATACATCCAGAAAATCTAGAAGAAGTATCACCATCAGACTCAGCTTCACTAGCAGAGAAAACATGTCCTCCGACATGTGAAGATGCCAAACAGGACTTGGAGGTGGATGAATCCGTTACTACAACAGTGCAAGCTGGCATTTTTAGAAAGTCAGATACTGAACCACCAAGTAGATTTCTTCAAGAAAGTATGAGATCTTATTACCGTAGTTGTGTAGATAAGGCAGAGAACAGCTTATGGACATACAAATACAAGCCAACAAAGGCTGTTGAGGTATGTGGTAATGATGAATCAGTGAACTTCTTGCGTGATTGGCTACATCTTTGGCATGAAAGACGTTATAAAAGCAGGAAGGATATCTCTGACATGGATAAAAGTGACATGCGAGATGTTGATGATGATTATAAATGCTCTTGTAGCGACTACGATTCAGAAGATATAAATGAGGAGGATTCCCTGCAGAATGTTCTTTTAATTACAGGACCAATTGGGAGTGGCAAGTCTGCAGCAGTCTATGCTTGTGCTGAAGAGCAAAGGTTTGAGATTTTAGAGCTTAATGCATCAGATTGTAGAAATGGAACTGCTGTCAGGAATTATTTTGGAGATACTCTTGGTTCACTTGGGTTTAAAAGGGCATCAGAAATCACTTCAAGTTCACAGAAGAAAACTACAAAGTTGTCCCCGGCTTCGGCTTTGCAAAGTGGTAAAGCTGCTGATGAGGTGAATGATGGGGTGAATGAACTGATAACCATATCTGATGATGAAGCTCATATCCCCAGTGGATCATCACAGAAGTTACTTGGCAAAAACAATGTAGTTGCATCATGTGATAAAGTGCAAACTTTAATTCTAATTGAGGATGTAGACATCCTTTCTCCTGAAGACCGTGGATGTATTGCTGCCATACAACAGATTGCTGAGACTGCAAAGGGGCCAATTATATTGACCAGTAATAGTGTGAATCCTGGCCTGCCAGGTAATTTTGACGTGCTCCATGTTTCATTCATGTTGCCATCGCCACAGGAGTTGCTTTGCCATTTGTACACTGTTTGTCTCACTGAAGGAGTCAACATCCATCCTCTTTTACTGGAGAAGTTTATACATTCTTGTGATGGAGATATCCGAAAATCCATTATGCATCTTCAGTTCTGGTTTCAGAGTAAAAGATTTCAAAAAGATGTAATGACACAAACATGTTATGGCTCACTTCCATTTGATCTTGAGCTTGGCCATCAGATACTACCAAAGATAATGCCCTGGGATTTCCCCTCAGAGATATCCGAACTAATTGAGAATGAAATCGCCAAATTAACAAATATAATGGAAGAAAACTCTAGAGGGTTAGTTACAGAAGAGCTTCTTCCCATAAATGAGCAGCAAAATGATTTAAATGTGCAGTGTATGGAGGCTGATTATATAGAGGCCAAGAAGGTGGAGATGATTAAGAGAAATGGGTCTTTGACAGATTACAGTGAGCTTGAAATTCAATATAATGCTATTTCTGAGTTTTCCAATTCTTCTGGTTCCCCACTTACATCTTCTCGGCATAATGGTCGAAGGAAACTTGTAGTTATGTCCTCTGATTCTGAGGATGAGGATTCAAATAATGGGTATCCTGTAGACACACATGAAGAAGCTAATACAAGACAATCGATGAAAGAAAATAATGGATATCCCTCTGAACTTCAATTAAATGGAAACTACCCTAGTACATCAGTTCGCAAGCTGCTTTGTTCCGAATTGGAGCATTCAGAGGAGGAACATTTTAAATATTCAGAAACAACTGATGATACATACGTAAATGAAACATGTAAATCATTAGATGTATCCTGTGTGCCAGAATCAACTTTTGTTCCTGAGACTGAAATTGAAAATGGAACGGAGTCAATGTATGAAGCAGTGTCTTCTGGCCCCCTTTTTGGTCCTCAGGAAGTTTCTGTTTATAATGAGTTGAAACCATTCACTTTCAGTGTTCCTAGGCACTTAACAAAACTGTCACAAAATCTAGATTTGTTGGATACTGAAATTTCAGATCATTCTTGTAAAGGAGTTCAACAAGATGTTCTAGATGAACATATGGAAACAATTGTTAATGTGATGGATGAGTGCAGTCGTGTGGATTTCAAACTAAAGCCAACGTGTTTGCAATCTAATTCATTTGCTGAGACAGAAAAGATACAAAAGTTGTGGGGAGATCTTCTTGAGTGTCGAATGGATTTAAGACAGCATGCTACCTCAGAACAGCTAGGTGCTTTTCAAGTTGTTAGACTTGCTAGTGGACTGAACAATCTAATTTCAGAAGCTGACTTATTTCATGAACGTGATATTATGGAACCTTCAGCGTTCCTTTCCGGTGAAACCACATCTATTCGGTATCATGAACAAATAATGACGTCCACCATTGCTGAACATGGGTTTTGCTTTTACGCTAAGCTTATAGCAGATGAAGCATCAAAGTTGGGTTGTGCAAATTGTGTTGATATTACTTCTGAGATGTTGGCTTCCACCATTAAATTAACTGGACAGGATCTCGCGAGAAGCAAAGTTATCTATACTGGAAAGCAAGTAGAGTGGAACAGCCCAATAAATAATACGCAGAAGAGTGAAAACAAAACATCTCAGTTCGAGGCCATCCAATCCATTGTTCCTGCAAGAATATACTTGGCATTAAAAGGTGATGTATTCAATGAATATCTATCTTCATTACGCCAAATTTCCAGGGCAGAAGCTTCCCGCAGTTCACAAGGAGTTGAGAAGAAGAGAAGAGGAAGGGTACGTGGTTTTCACCATTACTTGAACAGATGTACCACGTTGTCTCCTGAAGATATATCGTTGGTGAGTGAGGGTAATCTGTACAGAAAGAATTCTACACAACATACAACATAG 3621 0.4071 MDATVTQLSPSCNAAEPPRRIVRRRLVQTTLFPHKPPEPVEKNDKEDERHEDYSDAENHKKRKKPKAKTTPRKKASKQNATPKKNASANGTNKGSTSRQVLADYDPVNATEHDLFLEAKLAAEEDSRIFAGRQIHPFFSLWKAGKKVQDMADSGSNLSTTKSEEERTTCGPIHVFENTQDDTPSLDWRNWAFLENTTTMNYGPEILNSSVLEGSVESLNFDKLRSSLDPSGVSISQNALSSDRLCIHPENLEEVSPSDSASLAEKTCPPTCEDAKQDLEVDESVTTTVQAGIFRKSDTEPPSRFLQESMRSYYRSCVDKAENSLWTYKYKPTKAVEVCGNDESVNFLRDWLHLWHERRYKSRKDISDMDKSDMRDVDDDYKCSCSDYDSEDINEEDSLQNVLLITGPIGSGKSAAVYACAEEQRFEILELNASDCRNGTAVRNYFGDTLGSLGFKRASEITSSSQKKTTKLSPASALQSGKAADEVNDGVNELITISDDEAHIPSGSSQKLLGKNNVVASCDKVQTLILIEDVDILSPEDRGCIAAIQQIAETAKGPIILTSNSVNPGLPGNFDVLHVSFMLPSPQELLCHLYTVCLTEGVNIHPLLLEKFIHSCDGDIRKSIMHLQFWFQSKRFQKDVMTQTCYGSLPFDLELGHQILPKIMPWDFPSEISELIENEIAKLTNIMEENSRGLVTEELLPINEQQNDLNVQCMEADYIEAKKVEMIKRNGSLTDYSELEIQYNAISEFSNSSGSPLTSSRHNGRRKLVVMSSDSEDEDSNNGYPVDTHEEANTRQSMKENNGYPSELQLNGNYPSTSVRKLLCSELEHSEEEHFKYSETTDDTYVNETCKSLDVSCVPESTFVPETEIENGTESMYEAVSSGPLFGPQEVSVYNELKPFTFSVPRHLTKLSQNLDLLDTEISDHSCKGVQQDVLDEHMETIVNVMDECSRVDFKLKPTCLQSNSFAETEKIQKLWGDLLECRMDLRQHATSEQLGAFQVVRLASGLNNLISEADLFHERDIMEPSAFLSGETTSIRYHEQIMTSTIAEHGFCFYAKLIADEASKLGCANCVDITSEMLASTIKLTGQDLARSKVIYTGKQVEWNSPINNTQKSENKTSQFEAIQSIVPARIYLALKGDVFNEYLSSLRQISRAEASRSSQGVEKKRRGRVRGFHHYLNRCTTLSPEDISLVSEGNLYRKNSTQHTT 1206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01009 1206 MobiDBLite consensus disorder prediction 463 482 - -
Gma06g01009 1206 MobiDBLite consensus disorder prediction 1 99 - -
Gma06g01009 1206 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 323 636 IPR027417 -
Gma06g01009 1206 CDD AAA 402 459 - -
Gma06g01009 1206 MobiDBLite consensus disorder prediction 785 800 - -
Gma06g01009 1206 MobiDBLite consensus disorder prediction 770 800 - -
Gma06g01009 1206 MobiDBLite consensus disorder prediction 80 99 - -
Gma06g01009 1206 MobiDBLite consensus disorder prediction 37 60 - -
Gma06g01009 1206 MobiDBLite consensus disorder prediction 61 79 - -
Gma06g01009 1206 PANTHER CHECKPOINT PROTEIN RAD17/RAD24-RELATED 76 1205 - -
Gma06g01009 1206 Gene3D - 583 646 - -
Gma06g01009 1206 Gene3D - 322 570 IPR027417 -
Gma06g01009 1206 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 76 1205 IPR004582 GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01009 Gma-Chr6 9425442 9435541 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01009 321 628 Core DNA Replication Machinery Family AT5G22010 25.157 1.02e-10 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01009 - - gmx:100784968 2348.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01009 06 9425442 9435541 Gma06g01009 06 9425442 9435541 ECH
Gma04g02389 04 54241521 54251289 Gma06g01009 06 9425442 9435541 GST