Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01005 ATGGAGGACCAAAATGGTAGTGGTAAGTTGAGCCAAGGGCTTCGCAAGGTGaagccttaccttgctatattgtcccttcagtttggctactcagggatgtatatcatcactatggtttctttcaagcatggcatgagtcattggatactctcagtgtaccgtcatgtagttgctgctattataatagtcccttttgcacttgtccttgaaagAAAAATAAGACCAAAGATGACTCTTCCCATCTTCCTGAGGATAGTGGCACTTGGTTTCCTTGAGCCAGTGCTAGATCAGAACTTGTACAACATGGGGATGAAGATGACCTCAACAACGTTTGCATCTGCCACTGTTAATGTCCTCCCGGCCATTACTTTTGTAATGGCACTCATTTTCAGgctagagaaggtgaacttgagaaaatttcacagtgtagccaaagtcattggaacccttataacagtttcaggagctatggttatgactctgtacaaaggccctGCCTTCCAAATCATAAAGGGTGGAGGAGCCATCAGCAACCATAGCAACTCTAGCAGTACTAGTACCACCGAACCCTCTGACCAGCACTGGATAGTTGGAACTGTTTATCTCATATCAAGTTGTGCTAGTTGGGCTGGCTTCTTCATTTTGCAATCATTCACTTTGAAGAAGTACCCGGCAGAGCTCTCACTGACAGCTTGGATTTGTGTGATGGGTATTATTGAGGGTTCAATCGCATCCCTTATATTTGAACGAGACTTCAGTGTATGGGCCATAGGCTGGGACTCAAGACTTCTTGCTTGTGTTTACTCTGGGGTGATTTGTTCTGGAATGGcatactatgtacaaggggttgtaaccagggaacgtggaccagtgtttgtgacttctttcagccctctatgtatgattatcaccgcagcattgggttcccttgtcttagccgaacaagttcatctaggaagTATATTTGGGGCCATTCTCATTGTGTGCGGACTTTACACTGTGGTGTGGGGCAAAAGCAAAGACCGTAAGAGCACAACAGAAATAGAGAAAGGCGAAAGCCAAGAATTGCCAATAAAGAACGGTACAAAATCAGCGTCAGACATATTTGATGGCATTGAAATCAATGTTCCTTCTGAGGTGTTGAAGAAAGGAGGAGGGAAAAATGTCCCACCAGCAACAACAACAACAACAACATCATGA 1200 0.3 MEDQNGSGKLSQGLRKVKPYLAILSLQFGYSGMYIITMVSFKHGMSHWILSVYRHVVAAIIIVPFALVLERKIRPKMTLPIFLRIVALGFLEPVLDQNLYNMGMKMTSTTFASATVNVLPAITFVMALIFRLEKVNLRKFHSVAKVIGTLITVSGAMVMTLYKGPAFQIIKGGGAISNHSNSSSTSTTEPSDQHWIVGTVYLISSCASWAGFFILQSFTLKKYPAELSLTAWICVMGIIEGSIASLIFERDFSVWAIGWDSRLLACVYSGVICSGMAYYVQGVVTRERGPVFVTSFSPLCMIITAALGSLVLAEQVHLGSIFGAILIVCGLYTVVWGKSKDRKSTTEIEKGESQELPIKNGTKSASDIFDGIEINVPSEVLKKGGGKNVPPATTTTTTS 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01005 399 PANTHER WAT1-RELATED PROTEIN 13 367 - -
Gma06g01005 399 SUPERFAMILY Multidrug resistance efflux transporter EmrE 259 340 - -
Gma06g01005 399 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 162 - -
Gma06g01005 399 Pfam EamA-like transporter family 29 149 IPR000620 GO:0016020|GO:0016021
Gma06g01005 399 Pfam EamA-like transporter family 198 335 IPR000620 GO:0016020|GO:0016021
Gma06g01005 399 PANTHER WAT1-RELATED PROTEIN 13 367 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01005 Gma-Chr6 9391006 9395510 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01005 14 375 Nodulin-like Gene Family AT4G08300 66.033 9.15e-174 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01005 - - gmx:100783910 751.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01005 06 9391006 9395510 Gma06g01005 06 9391006 9395510 ECH
Gma04g02393 04 54278566 54282676 Gma06g01005 06 9391006 9395510 GST