Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01003 ATGGGTACGTGGTTCACAAATGCAAGGCCGTATCTGCTGTTAGTGGCGGTTCAATTTGGCTCAGCAGGCATGTTCATATTTGCGATGGATGCTATAAAGAAGGGTATGAGCCATTACGTGTTCATCGTCTATCGTAATGCCATCGCCTCTGTATCTCTTGCTCCCTTCGCATTCGTTTTAGAaagGAAAATTAGGCCCAAGATGACTTTCCGGGTATTTTCAGAGATTATGGCACTGGCTTTTTTCGAAATAATACTGGACCAGTGCTTCGCCCTCTTGGGCATGAAATTCACGTCGGCATCTTTCCTATCTGCTGTTATGAACTCCGCACCCTCTGTTACTTTTGTGATGGCTGTCATTTTAAGAATGGAGCACATGAAGATTAAGGAGGTGGCATGTCAAGCCAAAGTGATTGGCACAGTAGTAACATTTGGAGGCACCTTGCTAATGGCACTGTACAAAGGCCCCGTGCTTAGTTTTATGCGATCATCAACTAGCCATGCTAGCCAACCTGAGAATGTGGTCACTCAAACTGGTAACCATTGGGTCATAGGGACATTGTTCCTCCTCATTGGTTGTGCTGGCTTTTCTGCATTTTACATATTACAGGCCATAACATTGAGAAAATACCCAGCAGAGATGTCGCTGGCCACTTGGGTTTGCTTTGTAGGAGCACTTCAAAGCTCTATTGTTGCAATCTTCGCAGAACGCCACCACCCTCATGCTTGGTCCCTTGGTTGGGATACACGACTCTTTGCTCCTGCTTACGCGGGAATAGTTACATCTGGAGTTCAGTATTACATACAAGGCATGGTCTCAAAAATTATGGGCCCAGTTATTGTGACTGCTTTTAATCCCCTGCGTATGATCATTGTTACGGCCTTGGCCTGCATCATCTTATCCGAGCAACTCTTCCTTGGAAGTATTATTGGAGCAGTAGTTGTGGTTCTTGGGCTTTATCTAGTTGTGTGGGGAAAAGCTAAAGAACGCAGAGAAAAGCCCAAAGCTGATAAGGAAACATACTTCTTATATCAAGATTTCGAACACAACCAGAGACCTGAGTACCAAGGTACAACAAGCGTCGTTCAAGATTGTGAACTAGTGCTATTATATATGGCTAGGATTACTCTTGAGCGCAAATCGAAGACCATAAACATTCAGGTGCTTAGCCCAATTGCTTCGACTGCGGAAAATGAGTCCCCAACGCGTTCGTGGCTTTGTAAGGAATCGCAGCAACGAGAGTCATGCCATGGACCACGACAGCGACTCCACAATTATTGTTTCCACCGAATGTTCATATTTGCCATGGATGCCATCAAGAAGGGTATGAGTCATTACGTGTTCACCGTCTACCGTAATGTCATCGCCTCTGTAACTCTCGCTCCCTTTGCATTTGTTCTTGAAAGGAAAGTTAGGCCCAAGATGACTGTCCGGATATTTTCAGAGATTATGGTGCTGGCTTTCTTCGAAATAATACTGGATCAATGCTTTGCCCTGTTGGGCATGAAATTCACGTCGGCATCTTTCCTATCTGCTGTGATGAACTCCGCACCCTCTGTTACTTTTTTGTTGGCTGTCATTCTAAAATTGGAGCACATGAAGATCAAAGAGGTAACATGTCAAGCCAAAGTGATTGGCACGGTAATCACTTTTGGAGGGACCTTGCTAATGGCAATATACAAAGGCCCAGTACTTAGTGTTATGAGGTCTTCAGCCAGCCACGCTGGCCAACCTGAGAATGTCACCAACCCCAGCGGTAACCACTGGATCATAGGGACATGTTTCCTCCTTATTGGTTGTGCAGGCTTTTCTGCGTTTTACATATTACAAGTCATAACATTGAGAAAATACCCAGCAGAGATGTCCCTGGCCACTTGGATTTGCTTTGTTGGTGCACTTCAAAGTTCTATTGTAGCAGTCTTCGTAGAACGCCACCATCTTCATGCCTGGGCCCTTGGTTGGGATACACGACTCTTTGCTCCTGCTTACGCGGGAATAGTTTCATCTGGAGTTCAATATTACATACAAGGCGTGGTCATAAAACTCATGGGTCCAGTTATTGTGACAGCTTTTAATCCCCTGCGTATGATCATTATTACTACCTTGGCCTGCATAGTCCTATCTGAACAACTCTACCTCGGAAGTATTATTGGAGCAACAGTTGTGGTTCTTGGGCTCTATCTTGTTGTGTGGGGAAAATATAAGGAATGCCACGGAAGATCAATGCCACCGTCCTCTGCAAATGATAACCCTCCAGAAGACCAACGGCAGCTACCGGTCACAGCTACTAGGAATGATAATAAGACTTAA 2310 0.4502 MGTWFTNARPYLLLVAVQFGSAGMFIFAMDAIKKGMSHYVFIVYRNAIASVSLAPFAFVLERKIRPKMTFRVFSEIMALAFFEIILDQCFALLGMKFTSASFLSAVMNSAPSVTFVMAVILRMEHMKIKEVACQAKVIGTVVTFGGTLLMALYKGPVLSFMRSSTSHASQPENVVTQTGNHWVIGTLFLLIGCAGFSAFYILQAITLRKYPAEMSLATWVCFVGALQSSIVAIFAERHHPHAWSLGWDTRLFAPAYAGIVTSGVQYYIQGMVSKIMGPVIVTAFNPLRMIIVTALACIILSEQLFLGSIIGAVVVVLGLYLVVWGKAKERREKPKADKETYFLYQDFEHNQRPEYQGTTSVVQDCELVLLYMARITLERKSKTINIQVLSPIASTAENESPTRSWLCKESQQRESCHGPRQRLHNYCFHRMFIFAMDAIKKGMSHYVFTVYRNVIASVTLAPFAFVLERKVRPKMTVRIFSEIMVLAFFEIILDQCFALLGMKFTSASFLSAVMNSAPSVTFLLAVILKLEHMKIKEVTCQAKVIGTVITFGGTLLMAIYKGPVLSVMRSSASHAGQPENVTNPSGNHWIIGTCFLLIGCAGFSAFYILQVITLRKYPAEMSLATWICFVGALQSSIVAVFVERHHLHAWALGWDTRLFAPAYAGIVSSGVQYYIQGVVIKLMGPVIVTAFNPLRMIIITTLACIVLSEQLYLGSIIGATVVVLGLYLVVWGKYKECHGRSMPPSSANDNPPEDQRQLPVTATRNDNKT 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01003 769 PANTHER WAT1-RELATED PROTEIN 430 761 IPR030184 GO:0016021|GO:0022857
Gma06g01003 769 PANTHER WAT1-RELATED PROTEIN 7 341 IPR030184 GO:0016021|GO:0022857
Gma06g01003 769 MobiDBLite consensus disorder prediction 743 769 - -
Gma06g01003 769 SUPERFAMILY Multidrug resistance efflux transporter EmrE 220 328 - -
Gma06g01003 769 Pfam EamA-like transporter family 591 730 IPR000620 GO:0016020|GO:0016021
Gma06g01003 769 Pfam EamA-like transporter family 184 323 IPR000620 GO:0016020|GO:0016021
Gma06g01003 769 Pfam EamA-like transporter family 10 150 IPR000620 GO:0016020|GO:0016021
Gma06g01003 769 Pfam EamA-like transporter family 433 557 IPR000620 GO:0016020|GO:0016021
Gma06g01003 769 PANTHER WAT1-RELATED PROTEIN 430 761 - -
Gma06g01003 769 PANTHER WAT1-RELATED PROTEIN 7 341 - -
Gma06g01003 769 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 154 - -
Gma06g01003 769 SUPERFAMILY Multidrug resistance efflux transporter EmrE 451 560 - -
Gma06g01003 769 MobiDBLite consensus disorder prediction 741 769 - -
Gma06g01003 769 SUPERFAMILY Multidrug resistance efflux transporter EmrE 632 734 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01003 Gma-Chr6 9357291 9369184 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01003 431 767 Nodulin-like Gene Family AT2G37460 42.730 3.07e-92 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01003 - - gmx:100776215 667.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02394 04 54294568 54302544 Gma06g01003 06 9357291 9369184 GST