Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01001 ATGAGTGCCGAGAAGAAGAAACTGATTGGCAGATTACGCCTATTTTTCACTAATGCAAAACCATACCTCTTAATGATTGGCTTGCAATTTGGCATGGCTGGAAATTACATCTTCGGCAAGGATGTTCTTAACCATGGCATGAGTCGTTTTGTGTTCATTGTTTACCGAAATGCTATGGCCACCATTGCTCTTGCCCCTTTTGCATTCTTTATTGAAAGGAAAAGTAGGCCTAAGATGACACTTTCAGTCTTTCTACAGATAATAGTCCTTGGATTCCTGGAGCCAGTTTTTAATCAAAGCTTCAATTACTTGGGGATGAAGTATACTTCGGCTTCATTCACATCTACTATTGTGAACGCTGTGCCCTCTATCACCTTTGTGCTTGCAGTCTTCGTCCGGTTGGAGCGTCTAAGACTTGCGGAGATTCGGAGTCAAGCCAAAGTGATTGGAACCATAGTAACCTTTGGAGGTGCTTTGCTAATGGCAATTTACAAAGGTCCTGCATTCGACCTTTTTCATTCTGAAAGCACAACCCATCGTGAAAGTGGAAGCACCTCCCCTCACAACAGCCACCAAACTGCTGGTGCTATTTATATACTAATGGGTTGTGTGGCTTTGTCGTCTTTCTACATTTTGCAGTCTATGACGGTAAAGAGATACCCAGCGGAGCTATCATTGGCAACGTTGATATGCCTGGCGGGAACCGTGGAAGCGTCTGCAGTGGCATTTGTGGCTGAACGTCACTCCCGAGCTTGGGCTGTTGGTTGGGATTATAGGCTCTATGCTCCTTTTTACACGGGAGTAGTTAGTTCAGGAATTGCATACTATGTTCAAGGGCTGGTGATGAAACTAAGAGGCCCCGTATTTGCAACAGCCTTCAATCCTCTTTGCATGATCATTGTTGCTGCTTTGGGCTCCCTTATATTAGGAGAACTGCTTCATCTCGGAAGTCTTATTGGAGGCATTGTAATCGCAGTGGGGCTTTACTCGGTTGTGTGGGGCAAAGCCAAGGATTATTCAGAACCCAAATTACCATCAGCAAATGCAGAAGACACAAAATCACTGCCAATTACTGCAACTGATGATTCCAAAATTGATATTATTTATGGGAATTTAGAAAAACAACCATCAACCAATCAGAAATTAGAGGAGACCAACAAAGTGGGGGACGAAAATTAA 1179 0.436 MSAEKKKLIGRLRLFFTNAKPYLLMIGLQFGMAGNYIFGKDVLNHGMSRFVFIVYRNAMATIALAPFAFFIERKSRPKMTLSVFLQIIVLGFLEPVFNQSFNYLGMKYTSASFTSTIVNAVPSITFVLAVFVRLERLRLAEIRSQAKVIGTIVTFGGALLMAIYKGPAFDLFHSESTTHRESGSTSPHNSHQTAGAIYILMGCVALSSFYILQSMTVKRYPAELSLATLICLAGTVEASAVAFVAERHSRAWAVGWDYRLYAPFYTGVVSSGIAYYVQGLVMKLRGPVFATAFNPLCMIIVAALGSLILGELLHLGSLIGGIVIAVGLYSVVWGKAKDYSEPKLPSANAEDTKSLPITATDDSKIDIIYGNLEKQPSTNQKLEETNKVGDEN 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01001 392 PANTHER WAT1-RELATED PROTEIN 14 366 - -
Gma06g01001 392 Pfam EamA-like transporter family 20 161 IPR000620 GO:0016020|GO:0016021
Gma06g01001 392 Pfam EamA-like transporter family 194 332 IPR000620 GO:0016020|GO:0016021
Gma06g01001 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 55 165 - -
Gma06g01001 392 PANTHER WAT1-RELATED PROTEIN 14 366 IPR030184 GO:0016021|GO:0022857
Gma06g01001 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01001 Gma-Chr6 9320980 9325768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01001 13 385 Nodulin-like Gene Family AT2G37460 46.684 5.02e-122 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01001 - - gmx:100782835 746.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01001 06 9320980 9325768 Gma06g01001 06 9320980 9325768 ECH
Gma04g02396 04 54333341 54338747 Gma06g01001 06 9320980 9325768 GST