Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00982 ATGGATGGGAAGCCTAACCCGTATTCCTCCTCCACGGACCTCCTCCGCGACGTTCAAGCCGCCTTGAAACGACACCGTCCTCTCGGTTCAATGCAGTCCAATTGCATAAGACCAAGGCGCACGCTACTTCCTCAAAGAAGAGCATCTAGCACTTCTTCTTCTTCTTCCGATGTCACCAATTCTCAAGAAGAAGCTTCTTCCAAGGATTCGCTCAACGCCGTCGTCCCTTCTCAAAACCTAGACTCTCAGAAGAAAGTCCAGTTTTCAGTTCCAAGCAACGCTGCCTCGCAGGATGGAAAGGCCACTGAGTTGGAGAATTTATCTTCTCACATGAGTTCGCTTGGATTCGCAGAAATGGAGTGGGTTGAAGGCAGCCAAATCGAAGCATGGTCGTCGTCGTCGTCGCTTGGATGCAACCAGCAGGAGAGTGTTCAGCAGGCGGGGATTGACGCGAGTTTGAAATGCGAGAGTGGAGTGAGTTCCGTGCTGCCGAAGAGAAGCGTGGTTACTCCGGATCATTTGCAGCAATTCAGAAGTTTTTTGAGTCAGCCAGCGACGCAATCTTCGGTGGTCGGACCTACTTGTGCCACAACTACATCTGTTCATTCAACTTCAGCGCCAATGCTGAATTCAACAACACGGTATTCTCATTTCCGTCAATATTGTGGCTCAAGTGTGGCTGCTGAGCCTTTGGGGGAGGTTAATGTTAATCCATGCCCTATAACTGAAGGGGTTGTGAAATCGATTGATGTTTCCATACAAGAAACCAATAGAATGCCAGTTGATCCGGGGGCAGAAGCTGAAGTCCGAGCTTCTGGTTCTTGTATTGATGATGCAGGGTCGTTATCCAAGGAGAGCAATCAATCTAAGGAGCAACAAGGGGGTGAGTTGAAAGAATCTGGCAATTCTAAGTATACTTCTTGTGATGATGGGAAAGGGAAAGAGGCTGTGGATGTTGCCACTGTACAAATGCAGGCTCCACTTCCCACAACCATAACCTCATCTTCAGATGTGAAGTTGGGGTCTTCTAAGGTAGAAAAACGAGAGAAGGCTGCAAGTAGTAAAGGTACATTGGGTGCCCGGAAAAGAACTTATGACCCTGATTTGTTTTTCAAAGTCAACGGCAAGCTTTATCAGCGACTTGGCAAGATAGGTAGTGGTGGAAGCAGTGAGGTGCACAAGGTGATTTCATCGGACTGTAGGATATATGCACTTAAAAAGATCAAGCTCAAGGGTCGTGATTATGCTACTGCATATGGGTTTTGTCAAGAGATTGAGTATCTAAATAGGCTGAAGGGAAAGGATAACATCATACAGCTTATAGATTATGAGGTGACTGACAAGGCTTTGCTTGAGGAAGTTATGAAAGGCTCCTTCAGTAATAAAGATGGCCGGGTCAAGGATGATGGATGTATATACATGGTGCTTGAATATGGGGAAATTGATTTGGCTCACATGTTGTCTCAGAAGTGGAAGGAACTGGATGGAAGCTACCAAACTATAGATGAAAACTGGCTTCGATTTTATTGGCAGCAAATTCTTTTAGCTGTCAACACTATTCATGAGGACCGGATTGTGCACTCAGACTTGAAGCCGGCTAACTTCCTCCTTGTCAAAGGCTCCCTAAAACTGATTGATTTTGGTATAGCCAAAGCAATAATGAGTGACACAACCAACATCCAACGGGATTCACAGGTGGGCACTCTAAGCTACATGTCTCCAGAAGCATTTTTGTGTAATGAAACTGATGCGAATGGAAACATCATAAAGTGTGGGCGACCATCAGATATCTGGTCCCTGGGTTGCATCCTTTATCAAATGGTATATGGCAGGACACCTTTTTCTGATTACAAGACATTTTGGGCCAAATTCAAAGTTATAACAGATCCAAATCATAAAATTACGTATGAACCAGTTTCAAACCCATGGCTTTTGGATCTTATGGAAAGGTGTCTAGCATGGGATCGCAATCAAAGGTGGAGAATTCCTCAGCTACTCCAACATCCTTTTCTTGTTCCTCCTGTACCATCTCATCCATGTTTGCCCCAAGATCATAGCTGTAAATTGCTACAACTTATTTCTGAAACTTGTACATATGACCCTGAAGCATCCCAACTGTGTAGTCGCCTCCAACGGCTTCTTAGCGACCCACTTGAGAAAACAACTCGCTCACTAAATTCAGGAGATCAACAACTAAAACTGCTGTCCCAAATGTCAGAACTCTGTATTCAGCTGCACGAACGTTTGACAAATACTGAATACAAGTAG 2268 0.4497 MDGKPNPYSSSTDLLRDVQAALKRHRPLGSMQSNCIRPRRTLLPQRRASSTSSSSSDVTNSQEEASSKDSLNAVVPSQNLDSQKKVQFSVPSNAASQDGKATELENLSSHMSSLGFAEMEWVEGSQIEAWSSSSSLGCNQQESVQQAGIDASLKCESGVSSVLPKRSVVTPDHLQQFRSFLSQPATQSSVVGPTCATTTSVHSTSAPMLNSTTRYSHFRQYCGSSVAAEPLGEVNVNPCPITEGVVKSIDVSIQETNRMPVDPGAEAEVRASGSCIDDAGSLSKESNQSKEQQGGELKESGNSKYTSCDDGKGKEAVDVATVQMQAPLPTTITSSSDVKLGSSKVEKREKAASSKGTLGARKRTYDPDLFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCRIYALKKIKLKGRDYATAYGFCQEIEYLNRLKGKDNIIQLIDYEVTDKALLEEVMKGSFSNKDGRVKDDGCIYMVLEYGEIDLAHMLSQKWKELDGSYQTIDENWLRFYWQQILLAVNTIHEDRIVHSDLKPANFLLVKGSLKLIDFGIAKAIMSDTTNIQRDSQVGTLSYMSPEAFLCNETDANGNIIKCGRPSDIWSLGCILYQMVYGRTPFSDYKTFWAKFKVITDPNHKITYEPVSNPWLLDLMERCLAWDRNQRWRIPQLLQHPFLVPPVPSHPCLPQDHSCKLLQLISETCTYDPEASQLCSRLQRLLSDPLEKTTRSLNSGDQQLKLLSQMSELCIQLHERLTNTEYK 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00982 755 SUPERFAMILY Protein kinase-like (PK-like) 372 681 IPR011009 -
Gma06g00982 755 MobiDBLite consensus disorder prediction 276 310 - -
Gma06g00982 755 CDD PKc_Mps1 376 671 - -
Gma06g00982 755 Pfam Protein kinase domain 378 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g00982 755 ProSiteProfiles Protein kinase domain profile. 378 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g00982 755 ProSitePatterns Serine/Threonine protein kinases active-site signature. 525 537 IPR008271 GO:0004672|GO:0006468
Gma06g00982 755 Gene3D Phosphorylase Kinase; domain 1 371 457 - -
Gma06g00982 755 MobiDBLite consensus disorder prediction 21 73 - -
Gma06g00982 755 SMART serkin_6 378 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g00982 755 MobiDBLite consensus disorder prediction 34 73 - -
Gma06g00982 755 ProSitePatterns Protein kinases ATP-binding region signature. 384 406 IPR017441 GO:0005524
Gma06g00982 755 MobiDBLite consensus disorder prediction 328 358 - -
Gma06g00982 755 Gene3D Transferase(Phosphotransferase) domain 1 493 674 - -
Gma06g00982 755 MobiDBLite consensus disorder prediction 341 358 - -
Gma06g00982 755 PANTHER MIXED LINEAGE PROTEIN KINASE 5 723 - -
Gma06g00982 755 PANTHER DUAL SPECIFICITY PROTEIN KINASE TTK 5 723 IPR027084 GO:0004712|GO:0007093|GO:0051304
Gma06g00982 755 MobiDBLite consensus disorder prediction 279 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00982 Gma-Chr6 9166138 9170682 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00982 384 672 MAP Kinase Kinase Kinase AT4G08470 30.100 5.32e-25 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Gma06g00982 Pkinase 1.7e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00982 K08866 - gmx:100780144 1501.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00982 06 9166138 9170682 Gma06g00982 06 9166138 9170682 ECH
Gma04g02414 04 54503075 54507546 Gma06g00982 06 9166138 9170682 GST