Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00981 ATGAAGGGGGAAGAAGAGAGGTCAGAGTGGAAGCTGCATCGTCTTGAGTGCCAGGTCCTCTCCAGGCTCGACCATGACAAGAGAAAATCTCTCACACCGTCCATACGCCTGATGCTTAGACTTCATCTTCGGAGGAAGCTGCAAAATGATAAGATCGTCCCAAGCACTGCAATGGACAACTACAACTTGGTGGAGGCATTAGTGGCTTACATGTCTGACATCACAGAGGAGCAACTGGTGCTTTATGCAAAGATGGCTAATCTTGTAAACTCCATACTGCAATGGCCAGAAATCAATATAAAAGAGATTGCAGAAAATTTTTCTAAGTTTGCATGTAATGCACATACCATTTGTGACAGTGAGTTGAGACCCGTGGGAACAGGATTGTATCCTGTTATTTCCATCATCAATCACAGCTGTTTGCCCAATTCTGTGTTGGTGTTTGAGGGAAGGTCCGCTTTGGTACCTACTGTGCAGCATATACCCACAGGTACTGAGGTGCCGATAAGTTATATAGAGACTGCTGGAAGCACTATGACTCAACAGAATGCTCTAAAGAGCATTTTGCAGGGTGAGTATGATGATATCCAAGAAAGTGCAATTCTAGAAGGATACAAATGCAAAAGTGAAAAATGTGGTGGTTTCTTGCTTTATGGGAAAGGATTCCAATGCCAAGGTTGTGGACTAGTTAGGGACAAGGAGGAGATAAAGAGAATTACAACTGAAATTAAATTGCTATCTGAAGAAAAAATTATCTCCTCTTCCACTTGCAATTATCAAGAAGCTATTTCCATATATAAATGGATTGAGAAGCTGCAAACAGAACTCTATCATCCTTTATCAGTCAACTTGATGCAAAATAGGGAGAAGATTTTGAAGTCACTAATGGAGCTGGAACACTGGGCAGAAGCTTTAGCATATTGCAAATTGACCATACCATTCTATCAAAGAGTGTATCCAGCTGTTCACCCTCTGCTTGGCTTGCAATATTATACTTGTGGAAAACTAGAATGGTATCTGGGAGACACAGATGAAGCTGTTAAATCACTGATCAAGGCCGTGGATATACTACGGATTACTCATGGCAcaaatacacctttcatgaaggacctcttgatgaagttggaagaagcccgtgccgaagcgtcttacagattgtcccctaaagagtag 1173 0.3862 MKGEEERSEWKLHRLECQVLSRLDHDKRKSLTPSIRLMLRLHLRRKLQNDKIVPSTAMDNYNLVEALVAYMSDITEEQLVLYAKMANLVNSILQWPEINIKEIAENFSKFACNAHTICDSELRPVGTGLYPVISIINHSCLPNSVLVFEGRSALVPTVQHIPTGTEVPISYIETAGSTMTQQNALKSILQGEYDDIQESAILEGYKCKSEKCGGFLLYGKGFQCQGCGLVRDKEEIKRITTEIKLLSEEKIISSSTCNYQEAISIYKWIEKLQTELYHPLSVNLMQNREKILKSLMELEHWAEALAYCKLTIPFYQRVYPAVHPLLGLQYYTCGKLEWYLGDTDEAVKSLIKAVDILRITHGTNTPFMKDLLMKLEEARAEASYRLSPKE 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00981 390 Gene3D SET domain 89 171 IPR046341 -
Gma06g00981 390 SUPERFAMILY TPR-like 257 356 IPR011990 GO:0005515
Gma06g00981 390 ProSiteProfiles SET domain profile. 1 172 IPR001214 GO:0005515
Gma06g00981 390 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 6 382 - -
Gma06g00981 390 Coils Coil 229 249 - -
Gma06g00981 390 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR1 6 382 - -
Gma06g00981 390 Pfam SET domain 100 171 IPR001214 GO:0005515
Gma06g00981 390 Gene3D Tetratricopeptide repeat domain 203 387 IPR011990 GO:0005515
Gma06g00981 390 SUPERFAMILY SET domain 65 171 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00981 Gma-Chr6 9160169 9165188 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gma06g00981 SET 3.7e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00981 K11426 - gmx:100789518 656.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00981 06 9160169 9165188 Gma06g00981 06 9160169 9165188 ECH
Gma04g02415 04 54507919 54513800 Gma06g00981 06 9160169 9165188 GST