Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00972 ATGGATCGCAAGAACCCGAGGCGAAAGCCCAAGCTCGAGCGCCGCAACGCTCTTAAGTACTCCTCCTCCGAATACGACGCCGGATCGTCCCCCTCCGACGACACGCTCTACACGCGCTCCATGGAGTTCTACGACCGCACGAGTTTCCGAATCGAGGGCGTCGAAGGCGAGTTCGATCGAATTTGCCGCAGTTTGGGCCTCTCCGGCCCAGAGGACTTCGCTATTCCCGCTGCGGCGTGGGAGGCCATAAAGTTTCGCTACTCTTCGGATATTCTCCCGAGACTGAAGCTCGATAACCTCGATATTCCCGAGGAGGAGGAAGGTGAAGAAGAATTGAAGGTAAACGAGGATATAATAGTTAATTCAGTAGAGGAAGGTAAATTGAGTGAAAAACACGGAGATAGTAGTAGTgttagggttagggttagggttagggttagggAGATAGATGAATCGAGCACTGGTATTAAGGGGACTCGGCCACCGATGCTGAAGCCGCCGCCGGGGGCGAGGGTTCAGGTGGTGGATGATAGCACGTGTTCCACGTGGGACCTTTTGAGGGACTTGGCTCCTCAAGGGGAAGAAGGGTTACCGTTGAACCGTTCCGAGAATGAGAGTGAAGTAGCGAGAGAAGTAGAGAGAGGAGCGGTGGAGAAGGAAGAAGGGGAAGTTGGTACTAGAGAGAGTCCGAAGAGGGAAGAGGAAGAGAATGTGGCTGGGCTTTCGGAGTCGTGTTCGTTTTCTACTTCCAACGAAGATGATTCTTCGAGTAGTACTACGGACCCTACGTCTAATAATATTTCTCCGCAAGGGAGAATCAAACGGATTATTACCGCCGAAAGCTGGCAGAAGGGTGAGTTTCTCGGGGGTGGCTCGTTTGGCTCTGTTTATGAAGGGATTTCCGATGATGGATTCTTTTTTGCTGTAAAAGAAGTTTCACTGCTTGATCAAGGGACTCAGGGAAAGCAGAGTGTATATCAACTGGAGCAGGAAATAGCACTTTTGAGTCAATTTGAGCATGAAAATATTGTTCAATACTATGGCACAGAAATGGATCAATCAAAGTTGTATATCTTTCTTGAGCTTGTAACGAAAGGTTCCCTTAGAAGCCTCTATCAGAAGTATACTCTTCGAGATTCCCAAGTATCTTCCTATACGAGACAGATTCTGCATGGTTTGAAGTATCTTCATGACCGAAATGTGGTTCACAGGGATATTAAATGTGCAAATATATTGGTGGATGCAAGTGGATCTGTCAAGCTTGCAGATTTTGGATTGGCAAAGGCAACCAAATTGAATGATGTTAAATCAATGAAGGGGACAGCATTCTGGATGGCGCCTGAGGTTGTAAAAGGAAAGAACAAGGGTTATGGCCTTCCAGCTGATATTTGGAGTCTGGGATGCACTGTACTGGAGATGTTAACAGGCCAACTTCCGTACTGTGATTTGGAATCTATGCAGGCATTATATAGAATTGGAAAAGGTGAGCGACCTCGTATTCCTGATTCTCTTTCGAGAGATGCACAAGATTTTATCCTGCAGTGCCTTCAAGTTAGTCCAAATGATCGTGCCACTGCTGCTCAACTTTTAAACCATTCATTTGTCCAAAGGCCACTTTCTCAGTCCTCTGGTTCTTCATTTCCTCATATTCACGGCCGGAAGGGTTAA 1668 0.4634 MDRKNPRRKPKLERRNALKYSSSEYDAGSSPSDDTLYTRSMEFYDRTSFRIEGVEGEFDRICRSLGLSGPEDFAIPAAAWEAIKFRYSSDILPRLKLDNLDIPEEEEGEEELKVNEDIIVNSVEEGKLSEKHGDSSSVRVRVRVRVREIDESSTGIKGTRPPMLKPPPGARVQVVDDSTCSTWDLLRDLAPQGEEGLPLNRSENESEVAREVERGAVEKEEGEVGTRESPKREEEENVAGLSESCSFSTSNEDDSSSSTTDPTSNNISPQGRIKRIITAESWQKGEFLGGGSFGSVYEGISDDGFFFAVKEVSLLDQGTQGKQSVYQLEQEIALLSQFEHENIVQYYGTEMDQSKLYIFLELVTKGSLRSLYQKYTLRDSQVSSYTRQILHGLKYLHDRNVVHRDIKCANILVDASGSVKLADFGLAKATKLNDVKSMKGTAFWMAPEVVKGKNKGYGLPADIWSLGCTVLEMLTGQLPYCDLESMQALYRIGKGERPRIPDSLSRDAQDFILQCLQVSPNDRATAAQLLNHSFVQRPLSQSSGSSFPHIHGRKG 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00972 555 Pfam Protein kinase domain 283 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g00972 555 SUPERFAMILY Protein kinase-like (PK-like) 279 538 IPR011009 -
Gma06g00972 555 ProSiteProfiles Protein kinase domain profile. 282 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g00972 555 MobiDBLite consensus disorder prediction 191 271 - -
Gma06g00972 555 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 44 548 - -
Gma06g00972 555 SMART serkin_6 282 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g00972 555 ProSitePatterns Protein kinases ATP-binding region signature. 288 310 IPR017441 GO:0005524
Gma06g00972 555 Gene3D Transferase(Phosphotransferase) domain 1 278 550 - -
Gma06g00972 555 MobiDBLite consensus disorder prediction 241 271 - -
Gma06g00972 555 MobiDBLite consensus disorder prediction 200 239 - -
Gma06g00972 555 MobiDBLite consensus disorder prediction 1 36 - -
Gma06g00972 555 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 44 548 - -
Gma06g00972 555 MobiDBLite consensus disorder prediction 153 174 - -
Gma06g00972 555 ProSitePatterns Serine/Threonine protein kinases active-site signature. 401 413 IPR008271 GO:0004672|GO:0006468
Gma06g00972 555 MobiDBLite consensus disorder prediction 22 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00972 Gma-Chr6 9045643 9052512 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00972 11 539 MAP Kinase Kinase Kinase AT4G08500 51.115 1.56e-165 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gma06g00972 Pkinase 2.1e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00972 K13414 - gmx:100778553 1030.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00972 06 9045643 9052512 Gma06g00972 06 9045643 9052512 ECH
Gma14g01662 14 45000526 45011153 Gma06g00972 06 9045643 9052512 PCT
Gma06g00972 06 9045643 9052512 Gma14g01662 14 45000526 45011153 PCT