Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00968 ATGCTCTGCTTCTTGTGTACTTTGTTGTTGCCGGTGATGACCGGGGGCCGATGTCACCCGTGGGAGGGTATGGCGGAGGGAGGTGATGCCGCCGCCGTGGAGAGACGGTGCGAGGTTAATTTTCCGGCGGAAATCCCTCGCGACTCTGCTGTTTGCAAAATTGACTACTTGTCCCAGGCTAGGAAATCGCTTGCGGAGCGTTCTCCTTTCGATGTAGCTGAAGAAACGTCGACTTCCGCGGCTGCGGTTACTCTGCCCAGTGGCTTGGCTGTTTTGCTGAACCGGCAGGGTGATAACAGGAGGCGTCCCAAGAAGTCTCATTCTGGCGCAAATAAGAGGAAATCGTCGAATAGGGCGAACCAGAAGAAGCCGGATGACTCTAACATTTGGATTGAGACGGAGCAGTACTTTAGGGACTTGACCGTGGCTGATATTGACACCTTGTTTGAGGCCTCTCGCATTTCTAGTTTAATGTCTCAGAACTGTTTCACCATCCCGTGTCTGGGAAATGCTCCTAGGTACAATGCAGTTACTAGTAATAGGGGGAATGGAATGGAGCCTGTTCCAAGATTCAATGAAGTAGTTTGTAgtgaggatggaaaaaagggtgaggatgaaaacaagggtgGTGAAGTGGTGGAAAATGAGGATGAATTGTTGGTAATTGAGGCAATTGATGATGTTACTGTTGAACAAGTTCCTCCTCAGGATGACAAGAGTGAGGACATTTCTGATTCTTCAGTTAGTTTAGAGTGGTTTTTAGGTTGTAGGAATAAGGTTTCTTTGACTTCTGAGCGCCCTACCAAGAAAAGGAGGCTTTTGGGTGTTGAAGCTGGTTTGGAGAAAGTTTCAATGACTTGTCCTTGTGATGAGGGCCAACTGTTTTGCCATTATTGTGGTAGGGGAGACACCAGCAGAGATTCCAATAGGTTAATTGTCTGTGCTTCTTGTAAAGTGGTAGTTCACCGAAAGTGCTATGGTGTGTATGATGATGATGTAGATGGGACTTGGATGTGTTCCTGGTGCAAGCAAAAGGTTGATGTTGATGAATCGTCGAATCCTTGTGTTCTTTGCCCAAAGAAGGGTGGCGCATTAAAGCCAGTTAATAGCAGCGCAGAAGGTGCGGGGTTGGTCCCATTTGTGCACTTGTTTTGCTCTCTGTGGATGCCTGAGGTTTATATAGATGATCTGAAGAAGATGGAACCTGTTATGAATGTGGGAGAAATCAAGGAAACCCGAAAGAAACTAATGTGTAGTGTTTGCAAAGCAAAGTGTGGTGCATGTGTTCGATGTAGCCATGGTATCTGCAGAGCTTCTTTCCATCCTTTATGTGCAAGGGAAGCTAGACATAGGATGGAGGTTTGGGCAAAGTATGGTAACAATAATGTTGAGTTGCGGGCTTTTTGCTTGAAGCACTCAGATCTACCAGAAAATAGAAGCATCTTGCCATTGAAAGGCTCTATCGCAGGTACGAATGATATTTCAGAAGCCAATGGCTTTCCAGTGGCATTGCCAGTGAGTGGTGAACAGAGCTTGAAAGATTGCAGGAATGGAGGATTAGCCTCTGATAGTAGTCCTGACAAACTGAACCATAATGATGAACTGCCAGATGGAGGACTATCTGATTGCAGGTTAAGTGCTCATGACGACATGTTGGGATGTGGTGCTGTGCCCCAACAAGATGTTGGAGTGGTAGGGAGAGCCAATGAGAATGTTGATGCATCTGACTCTCTCAGTTTTGCACTTGTTTTGAAGAAGTTGATTGATCGAGGAAAAGTTGATGTAAAAGACGTGGCATTGGAAATTGGCATTTCACCAGATACATTAACTGCAAATACCAATGAAGCTTATATGGCCCCTGATGTCCAACACAAAATAGTCAATTGGCTAAAAGCCCATGTATATACTAATGCATTTCAGAAGGGTTTAAAAGTTAAATTCAAACCAGCCAATGCATCCAAAAACGACAGTGAAGCCATAGATGGTTCTGACACTTTACCAATATCAGATTCGGGTTTGTTGGATCCTGTTGCTGTTAAGTCAGTTCCGCCCAGGAGAAGAACCACCAGTAACATTAGGATTTTGAAGGATAACAAAGTGATATGTTCATCTGAGGGGGTTATTGGTGAGAATGGGATGCCGGTGGACATGTGCAGAGTAGGTCAGTCTGACTGTGACAATCCAACCAATTATAATGAAGCATCCATTCCCAATGCAACTGAAATGAACTTAACCAAGTCTGAGGATATTTTTCATGAAGTTCAAGGCAATGCTTCTGGATGTGTTTCAGCAGGCAACTCTACTGCTTGTTTGCTAAATGCTTCTGTGCTTTCTGATCACTGTCTTGTTCATTCTGCTTCAGAACCACTTGATTTTGGTTTCATAAAGAAGGATGCAATCTCTAGTTACATTCATCCATACATCAACAAGAAATTGCTGCAGATTCGTGATGGGGTGCCCTTGGAGGACATTATATGTTCAAGTGATGAGGGAAATTCTTCTTTGGTTGAATCCTTTCGGGCTAGTGCCTGCTCAAGTAGCCAAAATCAGAATTTAACTTGCATTGATATTTCAAAGCCTGATGAAGTAAATATGGAGCAGTTGGTTAGGGCTAGAAAAATGGGACTTTTGGAATTTTCTCCACAAGATGAATTGGAGGGGGAACTTGTTTATTTTCAGCATAGATTATTGCAGAATGCAGTTGCAAAAAAGAGGCATATTGATAACTTAATCTACAGTGTTGCCAAGAGTTTGCCACACGAGATTGATAAGGCACATCAACAAAGATGGGATGATGTTATTGTTAATCAATATCTGCGTGATCTTAGAGAGGCAAAAAAGCAAGGCAGAAAAGAAAGAAAGCACAAAGAAGCACAGGCAGTGTTGGCTGCTGCAACTGCTGCTGCGGCAGCATCTACTAGGGCTCTCCGGAAAGACACCTTAGATGAATCAATGCAACAAGAGAATTTGTTAAAATTGGATACTCTAAATGGAAGAACCGGTGCTTGTTCTCAGCCGATGTCTCGAGCCAAAGAGACACTTTCAAGAGTAGCTGTGACAAGAACTTCGTCAGAGAAATATTCGGATTTTTGCATGCCAACCTCCGATTTGTCTAAGGAGCATTGTAAATCATGCGATATTTGCAGACGATCAGAGTTTATTTTAAACCCTATCCTAGTCTGCTCTGGTTGCAAGGTTTCGGTGCACTTGGATTGCTACCGTAGTGTGAAAGAAACAACAGGTCCATGGTACTGTGAGTTATGTGAAGATTTGTCATCTAGAAGCTCCGGGGCATCTGCTATCAATTTCTGGGAGAAGCCTGTTGCAGAATGTGCTCTCTGTGGTGGTACTACTGGTGCTTTTAGGAAGTCTTCTAATGGTCAATGGGTTCATGCCTTCTGTGCTGAGTGGGTTTTTGAGTCTACATTCAAAAGAGGACAAATAAATGCTGTTGAAGGAATGGAAACTTTGCCAAAAGGAGTTGACATTTGTTGCATCTGCCACCACAAGCATGGTGTATGCATGAAGTGTTGCTATGGCCATTGTCAGACCACATTCCATCCATCCTGTGCTAGAAGTGCTGGTTTGTACATGAATGTGAGGACTACTGGTGGCAAGGCTCAACACAAAGCTTACTGTGAAAAACATAGTTTGGAGCAGAAGGCAAAGGCTGAAACTCAAAAACATGGAATTGAAGAGTTAAAAAGTATCAGGCAAATTAGGGTTGAACTAGAGAGATTACGTCTCCTTTGTGAAAGAATTGTGAAACGTGAAAAAATAAAGAGGGAATTGGTACTATGTTCACATGACATACTGGCCTTTAAAAGAGATCATGTTGCTAGGTCCGTGCTGGTTCGAAGCCCTTTCATCCTTCCGGATGGTAGTTCAGAATCAGCTACAACGTCCCTTAAAGGGAACACAGAGGGATACAGATCATGCAGTGAACCACTTCAAAGATCAGATGATGTTACTGTGGACAGTTCAGTTTCTGCTAAGCGCCGTGTCAGAGTCGCCATATCTATGGACACAGACTCAAAATTGGACGATGACTGCTCAACCTCTCAAAGTCGATACAACCACAGGATTCCAGATAGATTGCAATTTTCTGGCAAGAAGGTTCCTCATAGAACTGCTGCATCACGTAATATTTCAGATGAAGGTGGATGGATATCCAAATCTAGAAATCATTCCGATAGATTCGGAAAAGAGCTTGTTATGACGTCAGATGAAGCATCTATGAAGAATTCAATGCTACCTAAAGGATATGCATATGTTCCTGCTGATTGCTTGTCAAATGAGAAGCACTCTGACGAGGACGTATATGCTAGTGAACCAGTGGAGCATGACAGGTAG 4353 0.4307 MLCFLCTLLLPVMTGGRCHPWEGMAEGGDAAAVERRCEVNFPAEIPRDSAVCKIDYLSQARKSLAERSPFDVAEETSTSAAAVTLPSGLAVLLNRQGDNRRRPKKSHSGANKRKSSNRANQKKPDDSNIWIETEQYFRDLTVADIDTLFEASRISSLMSQNCFTIPCLGNAPRYNAVTSNRGNGMEPVPRFNEVVCSEDGKKGEDENKGGEVVENEDELLVIEAIDDVTVEQVPPQDDKSEDISDSSVSLEWFLGCRNKVSLTSERPTKKRRLLGVEAGLEKVSMTCPCDEGQLFCHYCGRGDTSRDSNRLIVCASCKVVVHRKCYGVYDDDVDGTWMCSWCKQKVDVDESSNPCVLCPKKGGALKPVNSSAEGAGLVPFVHLFCSLWMPEVYIDDLKKMEPVMNVGEIKETRKKLMCSVCKAKCGACVRCSHGICRASFHPLCAREARHRMEVWAKYGNNNVELRAFCLKHSDLPENRSILPLKGSIAGTNDISEANGFPVALPVSGEQSLKDCRNGGLASDSSPDKLNHNDELPDGGLSDCRLSAHDDMLGCGAVPQQDVGVVGRANENVDASDSLSFALVLKKLIDRGKVDVKDVALEIGISPDTLTANTNEAYMAPDVQHKIVNWLKAHVYTNAFQKGLKVKFKPANASKNDSEAIDGSDTLPISDSGLLDPVAVKSVPPRRRTTSNIRILKDNKVICSSEGVIGENGMPVDMCRVGQSDCDNPTNYNEASIPNATEMNLTKSEDIFHEVQGNASGCVSAGNSTACLLNASVLSDHCLVHSASEPLDFGFIKKDAISSYIHPYINKKLLQIRDGVPLEDIICSSDEGNSSLVESFRASACSSSQNQNLTCIDISKPDEVNMEQLVRARKMGLLEFSPQDELEGELVYFQHRLLQNAVAKKRHIDNLIYSVAKSLPHEIDKAHQQRWDDVIVNQYLRDLREAKKQGRKERKHKEAQAVLAAATAAAAASTRALRKDTLDESMQQENLLKLDTLNGRTGACSQPMSRAKETLSRVAVTRTSSEKYSDFCMPTSDLSKEHCKSCDICRRSEFILNPILVCSGCKVSVHLDCYRSVKETTGPWYCELCEDLSSRSSGASAINFWEKPVAECALCGGTTGAFRKSSNGQWVHAFCAEWVFESTFKRGQINAVEGMETLPKGVDICCICHHKHGVCMKCCYGHCQTTFHPSCARSAGLYMNVRTTGGKAQHKAYCEKHSLEQKAKAETQKHGIEELKSIRQIRVELERLRLLCERIVKREKIKRELVLCSHDILAFKRDHVARSVLVRSPFILPDGSSESATTSLKGNTEGYRSCSEPLQRSDDVTVDSSVSAKRRVRVAISMDTDSKLDDDCSTSQSRYNHRIPDRLQFSGKKVPHRTAASRNISDEGGWISKSRNHSDRFGKELVMTSDEASMKNSMLPKGYAYVPADCLSNEKHSDEDVYASEPVEHDR 1450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00968 1450 ProSiteProfiles Extended PHD (ePHD) domain profile. 352 473 IPR034732 -
Gma06g00968 1450 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 290 348 IPR013083 -
Gma06g00968 1450 MobiDBLite consensus disorder prediction 514 535 - -
Gma06g00968 1450 ProSiteProfiles Zinc finger PHD-type profile. 1042 1091 IPR019787 -
Gma06g00968 1450 Coils Coil 939 959 - -
Gma06g00968 1450 PANTHER PHD FINGER PROTEINS 843 1440 - -
Gma06g00968 1450 PANTHER PHD FINGER PROTEINS 107 483 - -
Gma06g00968 1450 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1106 1218 IPR013083 -
Gma06g00968 1450 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 349 475 IPR013083 -
Gma06g00968 1450 Pfam PHD-zinc-finger like domain 1110 1216 - -
Gma06g00968 1450 Pfam PHD-zinc-finger like domain 354 472 - -
Gma06g00968 1450 Pfam PHD-finger 309 343 - -
Gma06g00968 1450 Pfam PHD-finger 1056 1089 - -
Gma06g00968 1450 MobiDBLite consensus disorder prediction 94 127 - -
Gma06g00968 1450 SMART PHD_3 1044 1089 IPR001965 -
Gma06g00968 1450 SMART PHD_3 295 343 IPR001965 -
Gma06g00968 1450 SMART PHD_3 1163 1217 IPR001965 -
Gma06g00968 1450 SMART PHD_3 417 473 IPR001965 -
Gma06g00968 1450 MobiDBLite consensus disorder prediction 1295 1317 - -
Gma06g00968 1450 CDD ePHD 1111 1216 - -
Gma06g00968 1450 ProSiteProfiles Extended PHD (ePHD) domain profile. 1108 1217 IPR034732 -
Gma06g00968 1450 PANTHER PHD-FINGER DOMAIN CONTAINING PROTEIN FAMILY-RELATED 843 1440 - -
Gma06g00968 1450 PANTHER PHD-FINGER DOMAIN CONTAINING PROTEIN FAMILY-RELATED 107 483 - -
Gma06g00968 1450 MobiDBLite consensus disorder prediction 1371 1395 - -
Gma06g00968 1450 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1021 1098 IPR013083 -
Gma06g00968 1450 SUPERFAMILY FYVE/PHD zinc finger 1037 1089 IPR011011 -
Gma06g00968 1450 ProSiteProfiles Zinc finger PHD-type profile. 293 345 IPR019787 -
Gma06g00968 1450 SUPERFAMILY FYVE/PHD zinc finger 286 345 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00968 Gma-Chr6 9008227 9019225 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00968 290 480 C2H2 Transcription Factor Family AT3G14740 29.016 2.35e-16 80.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Gma06g00968 zf-HC5HC2H_2 4e-24 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00968 - - gmx:100777481 2861.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00968 06 9008227 9019225 Gma06g00968 06 9008227 9019225 ECH