Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00964 ATGGAGGTGAGCGAATTCTATTTCCGTGTGAGTGAACAATGCCTCGCCAACCGCCGCCGTCACCGCCGTCGCAGCCGGGCGTTCTGGACCCCGAAATCTGGCGAGTCTGCTCTGGAACCACTGTGGAGATCCCCACGCTGCATTCTAGGGTTTACTACTTCCCGCAGGGACACTTCGACGTGTATCTTTCCGCCGCTGAACTTCCCGGCGGACCCGCCGGTGCAGAACCTCCTCGTCACCGACGTGCACGGCTTCGTCTGGGAGTTCCGCCACATCTACCGCGGGACGCCGCGGCGGCACCTGCTGACCACCGGCTGGAGCACGTTCGTGAACAACAAGAAGCTCGTCGCCGGCGACGCCGTGGTTTTCATGAAGAACTCCAGGGGAGGGTTGCTCGTCGGAATTCGCCGCACCACGCGCTTCTCTCCTGGGAAGGGTGGCGATGTCGGAACGAGGATCAAGGTGGATGAGGAGGAGGAAGAGGAAGAGGAGGTGAGAGAGGTTTTCTCGAGGGACGGGAGGGGGAAGCTGTCGGCGAAGGTGGTTGCGGAGGCGGCGGAACTGGCGGCGAGGAGCATGCCGTTCGAGGTTGTTTATTATCCGAAAGGTGGGTGGTCGGAGTTTGTGGTGAAGACTGAGGCTGTGAATGAAGCAATGAGTGTTGAGTGGAGCCACGGAATGAAAGTGAAGATCGCTACGGAGACAGATGATTCGTCCAGGGTGTCGTGGTGTCAGGGTACGGAGATGAATGCCAATGTCAAAGAGGCTCCACAGATGAGGATTCTTACTTGTGAAAGTAGCTGTACAGGTACTTCAAACAGGCTGGAGGCTGACCACCCTTTTGACCCACTAGTGTACCGTTTTCTTTTTTTGTTTCATGAAACTTGGATCTAA 894 0.5716 MEVSEFYFRVSEQCLANRRRHRRRSRAFWTPKSGESALEPLWRSPRCILGFTTSRRDTSTCIFPPLNFPADPPVQNLLVTDVHGFVWEFRHIYRGTPRRHLLTTGWSTFVNNKKLVAGDAVVFMKNSRGGLLVGIRRTTRFSPGKGGDVGTRIKVDEEEEEEEEVREVFSRDGRGKLSAKVVAEAAELAARSMPFEVVYYPKGGWSEFVVKTEAVNEAMSVEWSHGMKVKIATETDDSSRVSWCQGTEMNANVKEAPQMRILTCESSCTGTSNRLEADHPFDPLVYRFLFLFHETWI 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00964 297 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 58 256 IPR044835 GO:0003677|GO:0006355|GO:0009725
Gma06g00964 297 Pfam B3 DNA binding domain 76 138 IPR003340 GO:0003677
Gma06g00964 297 CDD B3_DNA 67 137 IPR003340 GO:0003677
Gma06g00964 297 Gene3D - 48 139 IPR015300 -
Gma06g00964 297 ProSiteProfiles B3 DNA-binding domain profile. 77 139 IPR003340 GO:0003677
Gma06g00964 297 Pfam Auxin response factor 185 250 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Gma06g00964 297 PANTHER AUXIN RESPONSE FACTOR 58 256 - -
Gma06g00964 297 SUPERFAMILY DNA-binding pseudobarrel domain 58 149 IPR015300 -
Gma06g00964 297 SMART B3_2 48 139 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00964 Gma-Chr6 8959749 8963890 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00964 50 246 B3 DNA Binding Superfamily AT1G77850 50.980 2.27e-63 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Gma06g00964 Auxin_resp 1.1e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00964 - - gsj:114414296 469.159