Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00950 ATGTCGTCGTCGTCGAATTCGCCATGTGCGGCGTGCAAGATTCAACGTCGGAAGTGCACGCAGGAGTGTGTTTTCGCGCCGTATTTTCCGCCGGACAACCCGCAGCGGTTCGCTTACGTGCATAAGGTGTTCGGGGCAAGTAACGTGGCCAAGCTTCTCAACGAGCTTAACGCGGCGCAACGCGAAGACGCGGTTAAGTCATTAGCATACGAGGCAGAAGCGCGTTTGCGGGACCCAGTGTATGGCTGCGTGGGCCTCATCTCCATACTCCAGCACAGGCTCAAACAGCTTCAGAATGAACTCCACCACGCCAAGAAAGAACTTGCTTCTCACATCGGATCCCACACCATGCTGCCTCCTGCACCTTCCCTACTACCGCCGGAGCAGCAGCCACGCACTTTTTCGCTTTTTCCTTTCAAACCCGCGTCCACTCATCAGCATGATCTTTTCGGCTTCCACGACGACGGTGGCGCATCTTCCGCTTCCCACGCCGGCGGATTCAACAGCCACCTCGCCGCCGTATTCTCGCCTTCCCCTGCCGTTGATCACGCCTTTTCTCACGCGCCGATGCAGTCTCTTACTCTTCCGCATCACCAACACCTAATGCGCTCCCCGATGCAACCCAAGCCTCAAACCGACCCAGCTTAG 648 0.5725 MSSSSNSPCAACKIQRRKCTQECVFAPYFPPDNPQRFAYVHKVFGASNVAKLLNELNAAQREDAVKSLAYEAEARLRDPVYGCVGLISILQHRLKQLQNELHHAKKELASHIGSHTMLPPAPSLLPPEQQPRTFSLFPFKPASTHQHDLFGFHDDGGASSASHAGGFNSHLAAVFSPSPAVDHAFSHAPMQSLTLPHHQHLMRSPMQPKPQTDPA 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00950 215 PANTHER LOB DOMAIN-CONTAINING PROTEIN 6-RELATED 3 143 - -
Gma06g00950 215 ProSiteProfiles LOB domain profile. 7 108 IPR004883 -
Gma06g00950 215 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 3 143 - -
Gma06g00950 215 Coils Coil 87 114 - -
Gma06g00950 215 Pfam Lateral organ boundaries (LOB) domain 8 105 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00950 Gma-Chr6 8850626 8852305 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00950 3 130 AS2 family AT5G66870 74.809 1.68e-64 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gma06g00950 LOB 2.1e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00950 - - gmx:100819170 437.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00996 04 11378217 11379594 Gma06g00950 06 8850626 8852305 GST