Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00947 ATGAGTTCAGCTCCCAGTATGAGAGTCAGCGAGCAAGAGCACTTTCATCTTGAGGATACTAGTGACATAGAGAGGTCTATTTGGGTGCTGAATCCTCCCAATCCACCACCTCTTAGGAACAAGCTATTTAGTCCACTGAAGAAAACTGTGTCCTTTTTTTCATCCAAGAAGAAAACTTGCCTTGGACATGCTGTTTCATTCTTGGAGAGTCTATTCCCAATCCTTACATGGTTCACAAATTACAAGGCCTCCAAATTCAAAGAAGATTTGCTAGCCGGTTTAACTCTTGCCAGCCTCAGCATACCTCAGAGTATAGGATATGCTAATTTGGCAAAACTTGATCCTCAATATGGTCTATACACCAGTGTTGTTCCTCCACTTATCTATGCTGTGATGGGGAGTTCAAGAGAAATTGCAATTGGGCCTGTAGCTGTAGTTTCATTGCTGCTATCCTCTTTGGTCCCCAAAGTGGTGGATCCTGCTGTTGATCCTGATGCCTACAGGAATGTCGTCTTTACTGTTACCTTATTTGCTGGAATCTTTCAAGCTGCATTTGGTATTTTCAGGTTGGGGTTTCTTGTGGATTTTCTTTCACATGCTGCACTTGTTGGATTCATGGCAGGCGCAGCCATCATGATTGGTCTTCAGCAGCTCAAGGGGTTGCTGGGGATTACTCACTTTACCAACAAAACTGATGTAATATCTGTATTGGAATCTGTTTATAAGTCGCTCCACCAACAAATCACATCTGGAGAAAAATGGTACCCTCTGAATTTTGTCATCGGGTGTTCATTCTTGATTTTCCTTTTAATTGCCCGATTTGTTGGCAGAAGAAACAAAAAACTTTTCTGGTTGCCTGCTATTGCTCCTCTTCTATCAGTTATATTATCAACTTTAATTGTGTATTTATCAAAAGCTGATAAGAATGGGGTTAACATAATAAAGCATGTCAAAGGAGGCTTGAATCCAAGTTCAGTTCAACAGTTACAATTCCATGGTCCACAAGTTGGTCAAGCAGCAAAAATTGGATTGATCTCTGCCGTTATTGCTCTTACTGAAGCAATAGCAGTTGGTCGATCTTTTGCTTCTATTAAAGGATACCATCTTGATGGCAACAAGGAAATGCTAGCAATGGGATGTATGAACATTGCTGGATCGCTCTCTTCATGCTATGTGGCAACTGGTTCTTTCTCAAGGACTGCAGTAAATTTCAGTGCTGGATGTCAAACATCAGTGTCAAATATTGTGATGGCAGTTACTGTGTTTTTGTGTCTTGAATTGTTTACAAGGCTTCTATACTACACTCCAGTGGCCATACTTGCTTCTATCATCCTCTCTGCACTTCCTGGATTAATTGACATAAGTGAAGCTTGCTATATTTGGAAGGTTGACAAATTTGACTTTCTAGCCTGCATTGGTGCTTTCTTGGGGGTCTTGTTTGAATCGGTGGAAATTGGTCTTCTTGTTGCAGTGTCAATCTCATTTGCAAAGATACTAATACAATCAATTCGACCTGGGATAGAAGTTCTAGGTAGAGTTCCAAGAACAGAAGCCTTCTGTGATGTTAGTCAATATCCCATGGCCACAAGCACTCCAGGCATGTTGGTGATTCGCATAAGCTCTGGCTCACTCTGCTTTGCAAATGCAAATTTTGTTAGAGAAAGAATACTAAAATGGGTCGCGGAAGAAGAAAACGAGCTTGCTAAGGGAAGAGTCCAAGCAGTAATCTTAGACATGAGCAACCTGATGAATGTTGATACTTCTGGGATTCTAATACTGGAGGAACTGCACAAGAGGTTGCTCTCGCGTGGCGTACAATTGGCTATGGTGAACCCAAGGTGGCTAGTGATTCACAAGCTCAAAGTGGCACATTTTGTGGATAAAATCGGAAGGCAGTGGGTTTTCCTTACTGTTGCTGAAGCCGTAGATGCATGTCTATCTTCTAAATTCCCTGACCCATGA 1962 0.4169 MSSAPSMRVSEQEHFHLEDTSDIERSIWVLNPPNPPPLRNKLFSPLKKTVSFFSSKKKTCLGHAVSFLESLFPILTWFTNYKASKFKEDLLAGLTLASLSIPQSIGYANLAKLDPQYGLYTSVVPPLIYAVMGSSREIAIGPVAVVSLLLSSLVPKVVDPAVDPDAYRNVVFTVTLFAGIFQAAFGIFRLGFLVDFLSHAALVGFMAGAAIMIGLQQLKGLLGITHFTNKTDVISVLESVYKSLHQQITSGEKWYPLNFVIGCSFLIFLLIARFVGRRNKKLFWLPAIAPLLSVILSTLIVYLSKADKNGVNIIKHVKGGLNPSSVQQLQFHGPQVGQAAKIGLISAVIALTEAIAVGRSFASIKGYHLDGNKEMLAMGCMNIAGSLSSCYVATGSFSRTAVNFSAGCQTSVSNIVMAVTVFLCLELFTRLLYYTPVAILASIILSALPGLIDISEACYIWKVDKFDFLACIGAFLGVLFESVEIGLLVAVSISFAKILIQSIRPGIEVLGRVPRTEAFCDVSQYPMATSTPGMLVIRISSGSLCFANANFVRERILKWVAEEENELAKGRVQAVILDMSNLMNVDTSGILILEELHKRLLSRGVQLAMVNPRWLVIHKLKVAHFVDKIGRQWVFLTVAEAVDACLSSKFPDP 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00947 653 CDD STAS_SulP_like_sulfate_transporter 525 638 - -
Gma06g00947 653 PANTHER SULFATE TRANSPORTER 14 652 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gma06g00947 653 SUPERFAMILY SpoIIaa-like 530 645 IPR036513 -
Gma06g00947 653 ProSiteProfiles STAS domain profile. 541 645 IPR002645 -
Gma06g00947 653 TIGRFAM sulP: sulfate permease 73 641 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gma06g00947 653 Gene3D STAS domain 504 648 IPR036513 -
Gma06g00947 653 Pfam STAS domain 525 641 IPR002645 -
Gma06g00947 653 Pfam Sulfate permease family 86 472 IPR011547 GO:0016021
Gma06g00947 653 PANTHER SLC26A/SULP TRANSPORTER-RELATED 14 652 - -
Gma06g00947 653 ProSitePatterns SLC26A transporters signature. 115 136 IPR018045 GO:0008271|GO:0008272
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00947 Gma-Chr6 8792208 8797031 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00947 24 649 Inorganic Solute Cotransporters AT5G10180 64.308 0.0 826
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00947 K17469 - gmx:100805269 1216.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00947 06 8792208 8797031 Gma06g00947 06 8792208 8797031 ECH
Gma14g01695 14 45951684 45957017 Gma06g00947 06 8792208 8797031 PCT
Gma06g00947 06 8792208 8797031 Gma14g01695 14 45951684 45957017 PCT