Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00946 ATGTCTTCAATGGGTCCTCCTGCTGATGAAAATCTTGAAACAAAAGAGATCGATCTCAGAAGTATGTCATCTTCTTCACTTGGTCAGGCACCACAAGCCCACAAAGTAGCAATTCCTCCAAGACAGAACCTCTTCAAGGAATTCCAATCCACTATAAAAGAAACATTCTTTTCTGATGATCCTCTAAGACCCTTCAAAGATCAACCTAGATCAAGGAAGATTAGGCTCGGTATTGAGGCCATATTCCCAATACTTAGTTGGGGGAGAAGTTACAACCTTAAAAAATTTAGAGGAGATATAATATCCGGTCTCACTATTGCAAGTCTTTGCATTCCTCAGGATATTGGATACGCCAAGCTTGCACATTTGGCTCCACAGTATGGACTGTACTCCAGTTTTGTTCCACCACTGATTTATGCTGTCATGGGTAGCTCTCGTGATATTGCTATAGGACCAGTGGCAGTGGTTTCACTCTTGTTGGGGACCTTACTAAGTAATGAGATTGATCCTAAAACAAATCCAACAGAATATCAGCGACTTGCTTTTACAGCAACTTTTTTTGCTGGGATTACTCAAGCAACACTTGGTGTTCTTAGGTTAGGATTCTTGATTGACTTCCTATCACATGCTGCTATTGTTGGTTTTATGGGGGGAGCTGCTATCACAATTGCCCTCCAACAGCTTAAGGGTTTCCTTGGCATTAAAACTGCACACTTCACAACGGACACTGATATTGTCCATGTGATGCGTTCAGTATTCTCAGAAGCCCATCATGGATGGAACTGGCAAACTATACTCATCGGAGCTAGCTTTTTGGGTTTTCTTCTGGTTGCCAAATATATTGGAAAGAAAAACAAGAAATTCTTCTGGGTGCCAGCAATTGCTCCATTGATATCCGTTATTTTATCCACTTTTTTTGTATTCATAACCCGTGCAGATAAGCAAGGAGTAGACATTGTAAGAAAAATAGAAAAAGGCATCAATCCTTCATCTGTTAAAGATATTTATTTTACCGGAGAATACCTTGGAAAAGGTTTTAAAATTGGCATCGTGGCTGGCATGATAGCATTGACTGAAGCCACAGCAATTGGAAGAACATTTGCATCTATGAAGGACTATCAATTGGATGGAAACAAAGAAATGGTGGCATTAGGAACAATGAATGTTGTTGGTTCCCTGACTTCGTGTTATGTAGCAACAGGTTCTTTCTCTCGGTCCGCGGTAAATTACATGGCAGGCTGCCAAACTGCAGTCTCTAATATTGTGATGTCAGTGGTTGTGTTATTAACCCTGGAATTCATCACTCCTCTTTTCAAGTACACCCCAAATGCCATTCTTTCTGCCATCATCATTTCTGCTGTCATCAGCCTTGTAGACTATGAGGCAGCAATTTTGATTTGGAAGATAGATAAATTTGATTTTGTTGCTTGCATGGGTGCCTTCTTTGGGGTTGTTTTTGTCTCGGTTGAGATAGGACTTCTAATTGCTGTCTCTATTTCCTTTGCAAAGATCCTATTACAAGTCACAAGGCCCCGAACTGCTATTCTAGGGAAGATTCCTAGGACTACTGTCTACAGAAACATTCAACAATATCCAGAAGCTAGTAAGATTCCAGGTGTACTGATTGTAAGAGTCGATTCTGCAATATATTTTTCCAACTCCAATTATGTTAAAGAAAGGACATTAAGATGGTTGATGGACGAAGAAGAACAAGAAAAAGGAGACTACCGCACAAAAATCCAGTTTTTGATAGTTGAAATGTCACCCGTTACCGACATAGACACAAGTGGCATCCAAGCCTTTGAAGAGTTACACAGAAGTCTTGAGAAGAAGGGTGTTGAGCTTGTTTTGGCAAATCCTGGGTCAGCAGTGACAGACAAGCTTTACGCATCCAGTTTTGCAAACACGATTGGCGAGGACAAGATCTTCCTCACTGTTGCAGAGGCTATTGCATATTGTTCTCCAAAGGTGGTTGAGGACCCTTGA 1986 0.4089 MSSMGPPADENLETKEIDLRSMSSSSLGQAPQAHKVAIPPRQNLFKEFQSTIKETFFSDDPLRPFKDQPRSRKIRLGIEAIFPILSWGRSYNLKKFRGDIISGLTIASLCIPQDIGYAKLAHLAPQYGLYSSFVPPLIYAVMGSSRDIAIGPVAVVSLLLGTLLSNEIDPKTNPTEYQRLAFTATFFAGITQATLGVLRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIKTAHFTTDTDIVHVMRSVFSEAHHGWNWQTILIGASFLGFLLVAKYIGKKNKKFFWVPAIAPLISVILSTFFVFITRADKQGVDIVRKIEKGINPSSVKDIYFTGEYLGKGFKIGIVAGMIALTEATAIGRTFASMKDYQLDGNKEMVALGTMNVVGSLTSCYVATGSFSRSAVNYMAGCQTAVSNIVMSVVVLLTLEFITPLFKYTPNAILSAIIISAVISLVDYEAAILIWKIDKFDFVACMGAFFGVVFVSVEIGLLIAVSISFAKILLQVTRPRTAILGKIPRTTVYRNIQQYPEASKIPGVLIVRVDSAIYFSNSNYVKERTLRWLMDEEEQEKGDYRTKIQFLIVEMSPVTDIDTSGIQAFEELHRSLEKKGVELVLANPGSAVTDKLYASSFANTIGEDKIFLTVAEAIAYCSPKVVEDP 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00946 661 MobiDBLite consensus disorder prediction 1 35 - -
Gma06g00946 661 ProSitePatterns SLC26A transporters signature. 125 146 IPR018045 GO:0008271|GO:0008272
Gma06g00946 661 PANTHER SULFATE TRANSPORTER 13 661 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gma06g00946 661 Coils Coil 566 586 - -
Gma06g00946 661 PANTHER HIGH AFFINITY SULFATE TRANSPORTER TYPE 1 13 661 - -
Gma06g00946 661 Pfam STAS domain 531 649 IPR002645 -
Gma06g00946 661 SUPERFAMILY SpoIIaa-like 532 654 IPR036513 -
Gma06g00946 661 CDD STAS_SulP_like_sulfate_transporter 531 646 - -
Gma06g00946 661 Pfam Sulfate permease family 96 478 IPR011547 GO:0016021
Gma06g00946 661 TIGRFAM sulP: sulfate permease 83 649 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gma06g00946 661 ProSiteProfiles STAS domain profile. 530 653 IPR002645 -
Gma06g00946 661 Gene3D STAS domain 510 657 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00946 Gma-Chr6 8775154 8779626 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00946 1 660 Inorganic Solute Cotransporters AT1G22150 73.333 0.0 970
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00946 K17470 - gmx:100804208 1278.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00946 06 8775154 8779626 Gma06g00946 06 8775154 8779626 ECH
Gma04g00973 04 10264881 10271879 Gma06g00946 06 8775154 8779626 GST
Gma14g01696 14 46022237 46026367 Gma06g00946 06 8775154 8779626 PCT
Gma06g00946 06 8775154 8779626 Gma14g01696 14 46022237 46026367 PCT