Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00934 ATGATGACGAACCAAAATGTGGTGACTCATGAGGTTATTAACACGCTGATTGCCATGGCAGCTTCCATTTCAAACTCAACCGTGTTGCCAAGTGCAACAGTACCAGAATCCATGGCTGTGCTTGGTGGGTTTTGGGGGCTGCCCCATAATAAAAATCTTGTGAAAAGATTGGAAGGAGCCAAAGTTAGTGCATGGATTGATTCAATGAGAGCTTCTTCCCCAACTCGTGCCAAATCAGAAAGCCAAGAAAAAAGATCTTGGATTCTTTATCACCCTTCAGCTCTGAACACCTTTGAACAGATAGTATATAGTGCCAAAGGAAAGCAAATTGTAGTTTTTCTTGACTACGATGGAACTCTCTCTCCAATTGTTGCAGATCCGAATAAGGCTTTCATGACTAGAAAGATGAGAGCAACACTAAAGGGTATAGCAAGACATTTTCCCACAGCAATCGTGACTGGAAGGTGCAGAGACAAGGTATATAACTTTGTAAAATTGGCAGAACTTTACTATGCGGGAAGCCATGGCATGGACATCACTGGTCCAACAAAAAGTCCAAAGCAAGGTAATAATAATAATAAAGCAGTGCTGTTCCAACCCGCGAGTCAATTCCTGCCAATGATCGATGAGGTGTACAAGATCTTGTTAGAAAAAACGAAGACTGTCCCAGGGGCTAAGGTTGAGAACAATAAGTTTTGCTTGTCCGTGCACTTTCGTTGTGTTGACGAAAAGAGTTGGGCAGCGTTGGCGGAGAAAGTTAGATTGGTGCTCATTGAGTATCCACAACTTAGGCTAACCCAAGGGAGAAAAGTGCTAGAGATCCGTCCAACCATCAAATGGGACAAGGGCAAGGCTCTTGAATTTTTGTTAGAATCATTAGGGTACGAGAATTCGAATGATGTATTTCCAATCTATATTGGTGATGATCGAACTGATGAGGATGCTTTTAGGGTAACAAATGCTGCCACGCCTAGCTTGCTAGTTAGTTAG 990 0.4263 MMTNQNVVTHEVINTLIAMAASISNSTVLPSATVPESMAVLGGFWGLPHNKNLVKRLEGAKVSAWIDSMRASSPTRAKSESQEKRSWILYHPSALNTFEQIVYSAKGKQIVVFLDYDGTLSPIVADPNKAFMTRKMRATLKGIARHFPTAIVTGRCRDKVYNFVKLAELYYAGSHGMDITGPTKSPKQGNNNNKAVLFQPASQFLPMIDEVYKILLEKTKTVPGAKVENNKFCLSVHFRCVDEKSWAALAEKVRLVLIEYPQLRLTQGRKVLEIRPTIKWDKGKALEFLLESLGYENSNDVFPIYIGDDRTDEDAFRVTNAATPSLLVS 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00934 329 Gene3D - 112 320 IPR023214 -
Gma06g00934 329 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 112 321 IPR006379 -
Gma06g00934 329 TIGRFAM T6PP: trehalose-phosphatase 108 320 IPR003337 GO:0003824|GO:0005992
Gma06g00934 329 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 2 319 - -
Gma06g00934 329 Gene3D - 201 277 - -
Gma06g00934 329 SUPERFAMILY HAD-like 111 319 IPR036412 -
Gma06g00934 329 Pfam Trehalose-phosphatase 113 321 IPR003337 GO:0003824|GO:0005992
Gma06g00934 329 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 2 319 IPR044651 GO:0004805|GO:0005992
Gma06g00934 329 CDD HAD_TPP 111 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00934 Gma-Chr6 8649789 8652774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00934 76 324 Trehalose Biosynthesis Gene Families AT1G23870 24.818 2.91e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00934 K01087 - gmx:100815979 637.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00955 04 9838702 9840886 Gma06g00934 06 8649789 8652774 GST
Gma14g01718 14 46566067 46569045 Gma06g00934 06 8649789 8652774 PCT
Gma06g00934 06 8649789 8652774 Gma14g01718 14 46566067 46569045 PCT