Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00917 ATGGACAAGTTGTGCTGTTTTAAGGCTTCATACTCTCAGCTTGTAGCAGCACGTTCTTCCTCCAGCACTGGTAAGGGGAAAAATCATGAAGGCTCAATAAAGTATGGTTTCAGCCTTGTAAAAGGGAAAGCTAATCACCCAATGGAGGATTATCATGTTGCTAAGTTTGCACAGATAAAGGATAATGAATTGGGTTTATTTGCTATTTATGATGGTCACTTGGGTGACCGTGTGCCTGCCTACTTACAGAAACATTTGTTTACCAACATTTTGAGGGAGGAGGAATTTTGGGAGGACCCCACTCTTTCTATCTCAAAAGCATATGAGAGTACAGATCAGGAAATTCTATCACACAGTTCTGATCTTGGGCGTGGTGGATCAACGGCTGTAACTGCTATATTGATTAACGGACGAAGGTTATGGATAGCTAATGTTGGAGACTCAAGAGCTGTTCTATCAAGAAAAGGTCAAGCTGTACAAATGACAACAGACCATGAGCCTAACAAGGAACGAGGTAGCATTGAGACCAGAGGTGGTTTTGTCTCTAACTTGCCAGGTGATGTGCCTAGAGTAAATGGACAACTTGCTGTTTCTCGTGCATTTGGAGACAGGAGTCTCAAGTCACATTTGCGATCAGACCCTGATGTACAGTATACTGACATAGATGTTGATACTGAGATTCTAATCCTTGCAAGTGATGGACTTTGGAAGGTAATGACTAATCAAGAGGCAGTGGATATTGCTAGAAGAACGAGAGACCCTCAGAAAGCAGCTAAGCAACTAACAGCTGAAGCATTAAAAAGAGATAGTAAAGATGATATATCTTGTGTTGTGGTTAAATTCAGATGA 849 0.4146 MDKLCCFKASYSQLVAARSSSSTGKGKNHEGSIKYGFSLVKGKANHPMEDYHVAKFAQIKDNELGLFAIYDGHLGDRVPAYLQKHLFTNILREEEFWEDPTLSISKAYESTDQEILSHSSDLGRGGSTAVTAILINGRRLWIANVGDSRAVLSRKGQAVQMTTDHEPNKERGSIETRGGFVSNLPGDVPRVNGQLAVSRAFGDRSLKSHLRSDPDVQYTDIDVDTEILILASDGLWKVMTNQEAVDIARRTRDPQKAAKQLTAEALKRDSKDDISCVVVKFR 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00917 282 Gene3D - 13 282 IPR036457 -
Gma06g00917 282 MobiDBLite consensus disorder prediction 156 177 - -
Gma06g00917 282 CDD PP2Cc 33 281 IPR001932 -
Gma06g00917 282 Pfam Protein phosphatase 2C 43 274 IPR001932 -
Gma06g00917 282 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Gma06g00917 282 PANTHER PROTEIN PHOSPHATASE 2C 1 281 IPR015655 GO:0004722|GO:0006470
Gma06g00917 282 SUPERFAMILY PP2C-like 32 281 IPR036457 -
Gma06g00917 282 SMART PP2C_4 30 279 IPR001932 -
Gma06g00917 282 SMART PP2C_SIG_2 45 281 IPR001932 -
Gma06g00917 282 PANTHER PROTEIN PHOSPHATASE 2C 10-RELATED 1 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00917 Gma-Chr6 8466486 8470129 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00917 1 282 PP2C-type Phosphatase Gene Family AT1G22280 73.264 5.89e-153 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00917 K17506 - gmx:100797292 563.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00917 06 8466486 8470129 Gma06g00917 06 8466486 8470129 ECH
Gma04g00935 04 9474831 9477950 Gma06g00917 06 8466486 8470129 GST