Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00869 ATGGCGCTAAAAGCGGTTGAGCCCAGCGAGACTTGTACGGAGGTGGTGCTTGTTGATAGACGCGAGGACTCTCGCTTGAAGCTGCTTCAGGATAAAGCGCAAGAGTTGTATTGTGCTTCTGAGAACACGTTGCTGTTGGTGGAGCAACTAGGGAAACTTGTTGCCATTCATATGGGGGGTATGTTCCCGGTGGAGCAAGGAGATCTTCACAAGCGCTGGAAGTTGGCTAGTAAGAAGTTGAGGATTTTTCACAAGTGTGTTGTGCTTTCCATTGGCAGCCTGTCTAGTGGGCTTTGTAGGCATCGGGCCGTTCTTTTTAAGAGATTGGCAGATTATATAGGGTTGCCCTGTCGCATAGCTCGAGGTTGCAAGTATTGTGTTGCAGATCACAGGTCTTCTTGCCTAGTCAAAATTAAAGATGACAAGCAGTTCTCAAGGGAATATGTGGTCGACCTGGTTGGGGAACCAGGAAATATCCATGGGCCAGACTCCTCAATTAATGGAGCATATGTTTGGTCAATGCCTTCCCCATTTCAAATTTCTCATTTAAAAGAATCACAATCACCATATTTGGATGGCACAACAAGTTGTATAAGTTCAAATCTCAGACCTATTAATCCTGAGAGTCTTCCATATTCAGGCTCTGAACAGAATGATCAACAACTTAAAGAAACTGATTTGCTGAAAAGTCACAAGGGCTCCATTTATGCTTCAGTTGATCAAATCCGTGAAGGAACAGAACCATCTCTAGTTCCTTTTGGTTTAGAAGGGAATGATGAGGAATGTGCAGTTCATAGTTCAGTTTTGCCTACCATCTATGAAGATGTTTCAAAAGTTCTTCATCCAGCCATTGAAGCATCATTACATGAATACCCAATGCTTAGTGAAGATGTAGTACAAGAAACTTCCAACAATGAGATAATTGTAAATGAAAGTTCTGTGGTGAAAAGTACTTTCCAGCAATCTATGCTTGGTTCATCCTGCCAGTCAGAACTGAAACAGGTAGACATCAGAATTGAAAACCAGGGTTGTTTACCTGCTGGGAGTATTCCAAGATATGTGAATCTCGAACCATCACTTGCAATGGATTGGCTTGAGATATCATGGGATGATTTACGAATTAAAGAGCGTGTTGGTGCTGGCTCATTTGGGACAGTGTACCGTGCTGAATGGCATGGATCAGATGTTGCAGTCAAGGTTTTAACAGTTCAGGATTTCTATGACGATCAGTTGAAGGAGTTTCTGAGAGAGGTTGCAATAATGAAACGAGTTCGCCATCCAAATGTGGTACTCTTCATGGGGTCTGTTACAAAACGCCCCCATCTATCAATAGTGACAGAGTATTTGCCTAGGGGCAGTTTATACCGCCTGATACACAGACCAGCATCTGGTGAAATTCTGGATAAGAGGAGGAGATTACGAATGGCTTTGGATGTGGCTAAAGGGATCAATTATCTCCACTGTTTGAAACCTCCAATTGTGCACTGGGATCTCAAATCCCCAAACTTGTTAGTGGATAAAAATTGGACTGTGAAGGTTTGTGATTTTGGATTGTCCAGGTTTAAGGCAAACACTTTCATACCGTCCAAATCTGTTGCTGGAACACCCGAGTGGATGGCTCCAGAATTTCTTCGCGGTGAACCCTCCAATGAGAAATCTGACCCAATTATTTTTACTCGTGTTTATTTATACCGTAGTAGGGACCATTTGCAAGAATTTGTTAGTTTAAAAAGGACATATAATGTAAAGGTGGTTGGAGCTGTTGCTTTCCAGAATAGGAGGCTTGCTATCTCTCCAAACATCTCCCCGGCTTTGGCCTCCCTCATGGAATCTTGTTGGGAAGATGAACGCCCACCTTTTGGTAGCATAGTTGACTCACTAAAGAAGCTGGTAAAATCTCCAGCAGAGGTGATAAAGATGGCGGATACATAG 1932 0.4301 MALKAVEPSETCTEVVLVDRREDSRLKLLQDKAQELYCASENTLLLVEQLGKLVAIHMGGMFPVEQGDLHKRWKLASKKLRIFHKCVVLSIGSLSSGLCRHRAVLFKRLADYIGLPCRIARGCKYCVADHRSSCLVKIKDDKQFSREYVVDLVGEPGNIHGPDSSINGAYVWSMPSPFQISHLKESQSPYLDGTTSCISSNLRPINPESLPYSGSEQNDQQLKETDLLKSHKGSIYASVDQIREGTEPSLVPFGLEGNDEECAVHSSVLPTIYEDVSKVLHPAIEASLHEYPMLSEDVVQETSNNEIIVNESSVVKSTFQQSMLGSSCQSELKQVDIRIENQGCLPAGSIPRYVNLEPSLAMDWLEISWDDLRIKERVGAGSFGTVYRAEWHGSDVAVKVLTVQDFYDDQLKEFLREVAIMKRVRHPNVVLFMGSVTKRPHLSIVTEYLPRGSLYRLIHRPASGEILDKRRRLRMALDVAKGINYLHCLKPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFIPSKSVAGTPEWMAPEFLRGEPSNEKSDPIIFTRVYLYRSRDHLQEFVSLKRTYNVKVVGAVAFQNRRLAISPNISPALASLMESCWEDERPPFGSIVDSLKKLVKSPAEVIKMADT 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00869 643 Pfam Protein tyrosine and serine/threonine kinase 372 627 IPR001245 GO:0004672|GO:0006468
Gma06g00869 643 ProSitePatterns Serine/Threonine protein kinases active-site signature. 493 505 IPR008271 GO:0004672|GO:0006468
Gma06g00869 643 SMART serkin_6 372 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g00869 643 CDD STKc_MAP3K-like 378 627 - -
Gma06g00869 643 SUPERFAMILY Protein kinase-like (PK-like) 351 627 IPR011009 -
Gma06g00869 643 ProSitePatterns Protein kinases ATP-binding region signature. 378 399 IPR017441 GO:0005524
Gma06g00869 643 Gene3D Phosphorylase Kinase; domain 1 365 449 - -
Gma06g00869 643 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 640 - -
Gma06g00869 643 Pfam Ethylene-responsive protein kinase Le-CTR1 2 159 - -
Gma06g00869 643 Gene3D Transferase(Phosphotransferase) domain 1 451 640 - -
Gma06g00869 643 ProSiteProfiles Protein kinase domain profile. 372 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g00869 643 PANTHER SERINE/THREONINE-PROTEIN KINASE CTR1-LIKE ISOFORM X1 1 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00869 Gma-Chr6 7973800 7979701 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00869 1 641 MAP Kinase Kinase Kinase AT4G24480 60.583 0.0 765
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Gma06g00869 PK_Tyr_Ser-Thr 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00869 - - gmx:100808435 1147.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00880 04 8674597 8681650 Gma06g00869 06 7973800 7979701 GST
Gma14g01820 14 48628564 48635197 Gma06g00869 06 7973800 7979701 PCT
Gma14g00232 14 1969968 1975510 Gma06g00869 06 7973800 7979701 PCT
Gma02g02709 02 52815792 52820634 Gma06g00869 06 7973800 7979701 PCT