Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00857 ATGTCTACACTGACCCGTCTTTTTGATCTTCCGGAACAGATATGTTACATACAATGTGGATTCTGTAACACTATTTTAATGGTAAGTGTTCCATGCAGCAGTTTGTCGATGGTGGTGACAGTAAGATGCGGGCACTGCACAAACCTCCTTTCTGTTAATATGTTGAAAGCTTCTTTTATCCCTTTCCACCTCTTAGCATCTCTTAGTCATCTTGAGCCAAAAGAAAGTAGTCCAGAAGAAGATGCTAACAAGACTTTGAACAGTCACAGTGCATCCATGATGACCTATTCTGATTGTGAGGAAGAGGATATAATTCCAATGAGTCATCATGTTGTGAATAAACCCCCAGAGAAGAGACAGCGAACACCATCAGCTTATAACTGCTTCATCAAGGAGGAGATTAAAAGGCTAAAGGCTGAAAATCCTGAAATGACCCACAAGGAAGCTTTTAGTACAGCTGCAAAAAATTGGGCCAATTTCCCCCAAACTCAGTGGTGCAAAGGAGATGAAGAGAGGTGTAGCCAGACAGAAAAACTTGTTGATCTTGACTCACTAGTGGACCCTGCTGATGCTGAGGTCAATGAAGAAGTTCAAGGTTTCCGTGGAAGAAAGGTGCCAAGAAATTCCATCTTGGAAACGACACAGTTTGAATGA 654 0.419 MSTLTRLFDLPEQICYIQCGFCNTILMVSVPCSSLSMVVTVRCGHCTNLLSVNMLKASFIPFHLLASLSHLEPKESSPEEDANKTLNSHSASMMTYSDCEEEDIIPMSHHVVNKPPEKRQRTPSAYNCFIKEEIKRLKAENPEMTHKEAFSTAAKNWANFPQTQWCKGDEERCSQTEKLVDLDSLVDPADAEVNEEVQGFRGRKVPRNSILETTQFE 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00857 217 SUPERFAMILY HMG-box 109 163 IPR036910 -
Gma06g00857 217 Gene3D High mobility group box domain 108 177 IPR036910 -
Gma06g00857 217 PANTHER AXIAL REGULATOR YABBY 4 1 178 - -
Gma06g00857 217 PANTHER PROTEIN YABBY 6-RELATED 1 178 IPR006780 GO:0007275
Gma06g00857 217 Pfam YABBY protein 11 164 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00857 Gma-Chr6 7889591 7892179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00857 2 217 C2C2-YABBY Transcription Factor Family AT1G23420 55.022 1.60e-67 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Gma06g00857 YABBY 1.8e-63 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00857 K25796 - gmx:100779415 448.358