Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00853 ATGGTCTGTCCGGGTTCAACGCAATTGTCTCATGATGTTAGGCTCAACAGTAATATTGGATTCTGTAGTTTCCATCACAATCGGATGGGGGTTGGTCGATTACATTTGGTCACTATAAATCTTTCACCAAGTAATTTGAAGCAAGACTCTTCAGCATTCCATCTTTTAAGTAGACTACATGCCCCAATAAGGCATGTGCCTTCCAGATGTAATGTTTTCATTTGTCGGTCTGTCCTAATACCTGGTGGAGGGAGTGGGACTCCACTCATGAAATCTGCTAGTGTTATTTTAACAAGGTCATATGATGCTCTACAAGGAAACCCTATTTTCCTTCAATTGATCCCAGCCATTGGTATCATTGCCTTTGCTGTTTGCGGTCTTGAGCCACTCCTTCGTCTCAGCAGGGTTTTGTTCCTTCAGAGTACTGACATTAGTTGGAAGAAAAGTAGTTCGCAATCTATTATGACATCTTATATTCAGCCATTGCTGTTGTGGACTGGGGCAATGCTTGTATGCAGGGCATTAGATCCACTAGTCCTACCATCTGAGTCCAGCCAGGTTGTGAAGCAGCGGCTGCTGAATTTTGTGAGATCTTTGTCAACAGTGATTTCATTTGCTTACTGTTTATCAAGCTTAATTCAACAAGCGCAAAAATTCTTTCTGGAGGGAAATGACTCCAGTGGTGCAAGAAATATGGGCCTTGATTTTGCTGGGAAGGCAGTATATACTGCTGTATGGGTTGCTGCTGTTTCGTTGTTCATGGAGTTGCTAGGTTTCTCCACACAGAAGTGGGTAACTGCTGGTGGTTTGGGCACAGTATTGCTCACTCTGGCAGGTCGTGAGATATTTACAAACTTTCTTTCGAGCATAATGATCCATGCAACTCGGCCATTTATAGTAAACGAGTGGATTCAAACGAAGATTGAAGGATATGAGGTTTCTGGCACAGTTGAGCATGTAGGCTGGTGGTCACCAACCATCATCAGAGGTGATGATCGTGAGGCAGTTCATATTCCTAACCACAAGTTTACAGTAAATGTTGTGAGAAATCTGAGCCAGAAATCTCATTGGCGTATCAAGAGTTACATTGCTATCAGTCACTTGGATGTTAACAAAGTTAATAATATTGTAGCTGATATGCGCAAGGTTTTGTCTAAAAATCCTCAAGTAGAGCAGCAAAAATTACACAGAAGGGTCTTTTTGGAGAATGTCAATCCTGAAAATCAGGCTCTTATGATATTAATATCTTGCTTTGTGAAAACTTCTCATTTTGAAGAGTACCTCTGTGTTAAGGAGGCAATCCTTTTGGATCTTCTCAGAGTGGTCAGTCATCATCGAGCCAGGCTAGCCACTCCCATCCGCACTGTTCAGAAAATATACAGTGAGGCTGACTCGGAAAATATACCCTTTGGGGACACCATTTTCACTCGATCTAGAGCAGCAAATCGTCCATTTCTACTGATAGAACCACCGTATAAAGTTAATGGCGAAGATAAAGTTAAGGCTTCAACACGTTCAACTCGTGCAAATGAGGAAAAAGATTCCAAAATTGATGAAACCATGGCATCTGACACCAAAGAAGATGAGAATTTTACAGCAACATCAACCTCCTCACCTGATGTAATTTCCAAGGATAAATCCAAGTCATTGTCTGATGCCCAGCCTAAAAAGGAAAATGCAGTAGATGCAGGAAAGGGAACTACAGTTCCTGTATCTAAAAACCTTGTTCAAAGTGCTGTTCCTGAAGCCTCTCTTGCTACTACCCAAGAGATCACTTCTGCAACTTCTTCACAGTCAAAGCAAGATGAAGAGAAATCTTCTGTGTCTTTGCCATCAGTTAGGCCTTCCTTGGAAGAGAACATTCTTCTCGGGGTTGCCATAGAAGGCTCAAAACGAACTCTTCCAATTGAGGGAGAAATGACTCCATCTCCTATGCCTGCAGAGTCACAAGAATTTGCTGTTCAACGGAATGGGGGTGGACCTCCGGCTAGCAAGGATAAGAAGGATGGTCAGTCTTCATTTCCAACTGAATCTCTAAATAGTCCTGATATATGGTTTGTTCCCCACACCCGGGGTACCTCTGTCTCTCCTCGTTTCGTACAAGTGAAACTTTCCGAGCTTAGTTCAGGTTAA 2133 0.4248 MVCPGSTQLSHDVRLNSNIGFCSFHHNRMGVGRLHLVTINLSPSNLKQDSSAFHLLSRLHAPIRHVPSRCNVFICRSVLIPGGGSGTPLMKSASVILTRSYDALQGNPIFLQLIPAIGIIAFAVCGLEPLLRLSRVLFLQSTDISWKKSSSQSIMTSYIQPLLLWTGAMLVCRALDPLVLPSESSQVVKQRLLNFVRSLSTVISFAYCLSSLIQQAQKFFLEGNDSSGARNMGLDFAGKAVYTAVWVAAVSLFMELLGFSTQKWVTAGGLGTVLLTLAGREIFTNFLSSIMIHATRPFIVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLSQKSHWRIKSYIAISHLDVNKVNNIVADMRKVLSKNPQVEQQKLHRRVFLENVNPENQALMILISCFVKTSHFEEYLCVKEAILLDLLRVVSHHRARLATPIRTVQKIYSEADSENIPFGDTIFTRSRAANRPFLLIEPPYKVNGEDKVKASTRSTRANEEKDSKIDETMASDTKEDENFTATSTSSPDVISKDKSKSLSDAQPKKENAVDAGKGTTVPVSKNLVQSAVPEASLATTQEITSATSSQSKQDEEKSSVSLPSVRPSLEENILLGVAIEGSKRTLPIEGEMTPSPMPAESQEFAVQRNGGGPPASKDKKDGQSSFPTESLNSPDIWFVPHTRGTSVSPRFVQVKLSELSSG 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00853 710 MobiDBLite consensus disorder prediction 498 526 - -
Gma06g00853 710 MobiDBLite consensus disorder prediction 631 691 - -
Gma06g00853 710 Gene3D - 298 353 IPR023408 -
Gma06g00853 710 SUPERFAMILY Sm-like ribonucleoproteins 282 352 IPR010920 -
Gma06g00853 710 Pfam Mechanosensitive ion channel 239 446 IPR006685 GO:0016020|GO:0055085
Gma06g00853 710 MobiDBLite consensus disorder prediction 527 544 - -
Gma06g00853 710 MobiDBLite consensus disorder prediction 589 615 - -
Gma06g00853 710 MobiDBLite consensus disorder prediction 545 559 - -
Gma06g00853 710 MobiDBLite consensus disorder prediction 498 567 - -
Gma06g00853 710 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 674 IPR045042 -
Gma06g00853 710 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 2, CHLOROPLASTIC 1 674 - -
Gma06g00853 710 Gene3D - 192 296 - -
Gma06g00853 710 MobiDBLite consensus disorder prediction 589 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00853 Gma-Chr6 7848603 7860480 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00853 9 654 Mechanosensitive Ion Channel Family AT1G58200 56.444 0.0 737
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00853 K22047 - gmx:100777815 1317.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00864 04 8527328 8533798 Gma06g00853 06 7848603 7860480 GST