Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00852 ATGGAGAACTTTGTGCATGGACAGAGGCAGGATTCTTCAGCACTACATTCCAGATTACGGACCCCACTTAGGCCTGTACCTTTGAGATGTAATGCTTTGCCGTGGCGGTGTTCATTAATGCCAGCTGGTGGGTGTGAGACCCCACTTGTGAAAGTGGCTGCTGTTTCTTTGTCAAGGTCATATAATGCTATAGCAGGAAAACCAAGTGTGATTCAATTGATCCCTGCCCTTGGTATCATTGGCTTTGCTGTTTTTGGTCTTGAGCCGCTCCTACGCCTGAGCAGGAATCTTTTTCTCCAAGAAAGGACAGATTGGAAGAAAAGTAGTTCACATTATATTTTGACATCTTATTTTCAACCTTTGCTGCTGTGGACTGGGGTAATGCTCATCTGCAGGGATTTGGATCCACTAGTCCTACCATCAGAAACCAGTCAAGCTATTAAGCAACGGCTGCTGAGTTTTGTACGAACATTGTCAACTGTGCTTACATTTGCTTACTGTTCTTCAAGCTTAATTCGACAAGCACAAAAAATTTGTATGGAGACAAATGACTCCAGTGATGAAAGAAATATGAGAATTGATTTTACTGGGAAAGCTGTATATACTGCAATATGGGTTGCTGCTGTGTCATTGTTCATGGAGTTGCTGGGTTTCTCTACACAGAAGTGGTTGACTGCTGGTGGTTTGGGCACAGTATTGATTTCCCTTGCAGGTCGCGAGATATTTACAAACTTCCTTTCGAGTATAATGATTCATGCAACTCGGCCATTTGTTGTGAATGAGCGGATTCAAACAAAGATTAAAGGATATGAGGTTACTGGTAAAGTTGAGCATGTAGGCTGGTGGTCACCAACAATAGTTAGAGGTTCTGATTGTGAAGCAGTTCATATTCCTAATCACAATTTGAGTGTAAATGTTGTGAGGAATCTTAGTAAGAAATCTCATTGGCGCATCAAGACTCACCTTGCTATCAGTCACTTGGATGTTAACAAGATTAATAGTATTATAGCTGATATGCGCAAGGTTTTGGCAAAAAATCCTCAAGTAGAGCAGAAAAAATTGCACAGAAGGGTTTTTCTAGAGAATATTGATCCAGAAAATCAGGCTCTTATGATATTAGTATCCTGCTTTGTTAAAACTAGACATTCTGAAGAGTACCTCCGTGTAAAGGAAGCAATCCTCTTGGATCTTCTCAGAGTTATCAGTCATCATCGAGCTCGGCTAGCCACACCCATCCGCACAGTTCAGAAGATGTGCAGTGATACTGATTTAGATGTTGATCCATTTGATGACACCATTCCCACTCGTTCCAGATCAAAGAATAACCGTCCTTTCCCACTGATAAATCCACCTTATAAAGTTAAGCCTTCAACTACTACAAATGAGGACAAAGATACTAAGATTGATGAAACCTTGCCATCTGACTTCAAAGTAGAACGTGACAAATTTGCTGCGACATCGAGTTCAGTCCAGAAGACCTCCAAATCCCAAAAGCTCAAAAAGGAAAGAGTAGGAAGTTCAGAAAAGGGAACAACATCCAAAAATTTGTCAAAATCCAACGAGTTTGGTTCTGGAGAGACTACTTCACCATCAAAACTAGATGAAGAGAAATCTGTTATGTCATCATCATCAGCTAGTCACTCCTTGGAAGAGAATATTGTTCTTGATGCTGCCCTGCTGGGCTCAAAGAGAACTCTTGCAATTGATGAAGAATTGATTCAATCTATCCCTGCAGAACCACAGGAAGTTGCAGTCCATCAGGATGGGAGTGAACCTCCTATTTCCAAGGATAAGAAGGATGGTGAGATGTCTTCATTTCCTACTCCTAAACAAAAGGATTAG 1842 0.4115 MENFVHGQRQDSSALHSRLRTPLRPVPLRCNALPWRCSLMPAGGCETPLVKVAAVSLSRSYNAIAGKPSVIQLIPALGIIGFAVFGLEPLLRLSRNLFLQERTDWKKSSSHYILTSYFQPLLLWTGVMLICRDLDPLVLPSETSQAIKQRLLSFVRTLSTVLTFAYCSSSLIRQAQKICMETNDSSDERNMRIDFTGKAVYTAIWVAAVSLFMELLGFSTQKWLTAGGLGTVLISLAGREIFTNFLSSIMIHATRPFVVNERIQTKIKGYEVTGKVEHVGWWSPTIVRGSDCEAVHIPNHNLSVNVVRNLSKKSHWRIKTHLAISHLDVNKINSIIADMRKVLAKNPQVEQKKLHRRVFLENIDPENQALMILVSCFVKTRHSEEYLRVKEAILLDLLRVISHHRARLATPIRTVQKMCSDTDLDVDPFDDTIPTRSRSKNNRPFPLINPPYKVKPSTTTNEDKDTKIDETLPSDFKVERDKFAATSSSVQKTSKSQKLKKERVGSSEKGTTSKNLSKSNEFGSGETTSPSKLDEEKSVMSSSSASHSLEENIVLDAALLGSKRTLAIDEELIQSIPAEPQEVAVHQDGSEPPISKDKKDGEMSSFPTPKQKD 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00852 613 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 4 599 IPR045042 -
Gma06g00852 613 MobiDBLite consensus disorder prediction 591 613 - -
Gma06g00852 613 Gene3D - 147 255 - -
Gma06g00852 613 SUPERFAMILY Sm-like ribonucleoproteins 241 311 IPR010920 -
Gma06g00852 613 MobiDBLite consensus disorder prediction 576 613 - -
Gma06g00852 613 MobiDBLite consensus disorder prediction 509 547 - -
Gma06g00852 613 PANTHER MECHANOSENSITIVE ION CHANNEL-LIKE PROTEIN 4 599 - -
Gma06g00852 613 MobiDBLite consensus disorder prediction 426 547 - -
Gma06g00852 613 Pfam Mechanosensitive ion channel 198 405 IPR006685 GO:0016020|GO:0055085
Gma06g00852 613 MobiDBLite consensus disorder prediction 458 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00852 Gma-Chr6 7841957 7848159 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00852 9 571 Mechanosensitive Ion Channel Family AT1G58200 54.766 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00852 K22047 - gmx:100797302 1171.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00863 04 8499435 8506636 Gma06g00852 06 7841957 7848159 GST