Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00840 ATGGGTTACCTCTCTTGCAATGCCGAGTCCGCAATCGCCACCTGCGATCCCCACTTCAAGAAACACAAGCCCCTCGCCGCAACACCAATCCGACACTTCCACTACGCCGACATCGCCGCCGCTGCCAACGGCTTCTCCGCCGACACCTTCTTGGGTAGAGGAAGTCACGGCAGGGTCTACAGAGCTACCCTCGACGGCGGCAAGCTCCTCGCCGCCGTCAAAACAACAAAACTCGCCGGCACCACCTCGAAGAACCACGCCTCCAAATGCACCGGTTGCGGCAACTGCACCAGCCCCGCCGAAAACGAGATCGAGATCCTCTCCCAAGTCCCCAGCCCCCGCTTCGTTAACCTCCTCGGCTTCAGCACCGACCCAAACGGCAACAAATTAATCGTCGTCGAATACATGCCCAACGGTTCGCTCCACGATCTGTTACACTCCGTTAAAAAACCGCCCGGTTGGAGCCTTAGGGTCCGGTTCGCGCTTCAGGTCGCCAAAGCGGTTCGCGAATTACACTCTTCCAACCCTCCCGTTATTCACCGTGACGTTAAGTCTTCCAACGTTTTGATCGATGAAGAATGGAACGCGAGGCTCGGTGACTTTGGCCTCGCCTTAAGGGGACACGTGGAGGACGTTCGCGTCAAGTGCACTCCCCCCGCGGGGACGTTAGGGTACCTCGACCCCTGCTATCTTGCGCCGGAGGATCTCAGTGCTAAGAGCGACGTCTTCAGCTTCGGGATCTTGCTCTTGGAGATAATCAGCGGAAGAAACGCTATCGATGTTAACTTTAGTCCTCCGTCTGTGGTGGACTGGGCGGTGCCGTTGATTAAGCTCGGCGACTTCGCCGGAATCTGCGACCGGAGAATCGGACCGCAGCCGGACCCCGCCGTGCTGCGGCAGCTCGCGGTGCTGGCTGCCAGATGCGTGAGGTCGACGGCGGAGAAGCGTCCGTCAATGGCGGAGGTGGTGGAGTGCCTTAATCTGGCGAGGAAGAGGAATCGCGCGTCGCCGATTTGGAACAATTTGCGGAGGCGCGTGGCGAGCGTGGAGAGCGCGCTTCCGGTGTGGGAGGAGGAGTGTGATAGTGATAGGAGTGAGAAATTTGAGAGGATGGTGAAGAAAGGTGGGAAAGGGAAAGTATCGAGTGTGTCGCGTGTAGGGTATGGGAATGGGAGTGAGGCCTCCAATAATAATGATAAAGTGATGAGGTCAAAGTCCATTGGTTCTGGTTCTGGTTCGTTGAGAGGGAGTTGGGTTAAAATGCAACAGCAACAACACCAAACGGACAACGGCTTTGGAAGAAGGAAGGTGAGGCTAAAAAAGTCAAAGTCCATGGGGGTTTTGCAAGGTTCTCTGCTGTTACATTATGGCATCCAGAATAACAATAATGATGTTCGGGAATGGCCAAGTTGGAAAAGAAAATGCTGGAAAAACCGTTAG 1440 0.5569 MGYLSCNAESAIATCDPHFKKHKPLAATPIRHFHYADIAAAANGFSADTFLGRGSHGRVYRATLDGGKLLAAVKTTKLAGTTSKNHASKCTGCGNCTSPAENEIEILSQVPSPRFVNLLGFSTDPNGNKLIVVEYMPNGSLHDLLHSVKKPPGWSLRVRFALQVAKAVRELHSSNPPVIHRDVKSSNVLIDEEWNARLGDFGLALRGHVEDVRVKCTPPAGTLGYLDPCYLAPEDLSAKSDVFSFGILLLEIISGRNAIDVNFSPPSVVDWAVPLIKLGDFAGICDRRIGPQPDPAVLRQLAVLAARCVRSTAEKRPSMAEVVECLNLARKRNRASPIWNNLRRRVASVESALPVWEEECDSDRSEKFERMVKKGGKGKVSSVSRVGYGNGSEASNNNDKVMRSKSIGSGSGSLRGSWVKMQQQQHQTDNGFGRRKVRLKKSKSMGVLQGSLLLHYGIQNNNNDVREWPSWKRKCWKNR 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00840 479 PANTHER OS01G0750732 PROTEIN 1 460 - -
Gma06g00840 479 MobiDBLite consensus disorder prediction 379 415 - -
Gma06g00840 479 Gene3D Transferase(Phosphotransferase) domain 1 136 346 - -
Gma06g00840 479 ProSitePatterns Protein kinases ATP-binding region signature. 51 74 IPR017441 GO:0005524
Gma06g00840 479 SUPERFAMILY Protein kinase-like (PK-like) 26 326 IPR011009 -
Gma06g00840 479 Gene3D Phosphorylase Kinase; domain 1 8 135 - -
Gma06g00840 479 SMART serkin_6 45 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g00840 479 Pfam Protein tyrosine and serine/threonine kinase 49 326 IPR001245 GO:0004672|GO:0006468
Gma06g00840 479 MobiDBLite consensus disorder prediction 385 415 - -
Gma06g00840 479 ProSiteProfiles Protein kinase domain profile. 45 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g00840 479 PANTHER - 1 460 - -
Gma06g00840 479 ProSitePatterns Serine/Threonine protein kinases active-site signature. 178 190 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00840 Gma-Chr6 7758936 7760648 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00840 31 337 Receptor kinase-like Gene Family AT3G59420 40.064 3.50e-64 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Gma06g00840 PK_Tyr_Ser-Thr 1.4e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00840 - - gmx:100795721 945.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00840 06 7758936 7760648 Gma06g00840 06 7758936 7760648 ECH
Gma04g00852 04 8381640 8383439 Gma06g00840 06 7758936 7760648 GST
Gma02g02011 02 45609162 45610703 Gma06g00840 06 7758936 7760648 PCT
Gma06g00840 06 7758936 7760648 Gma02g02011 02 45609162 45610703 PCT