Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00818 ATGGTGGTGAGGAAAGTGGGGAAGTACGAGATTGGGAGAACGATTGGGGAGGGAACCTTTGCCAAGGTGAAATTCGCTCAGAACACAGAAACTGGCGAGAGCGTGGCCATGAAGGTGCTCGATAGAAGCACCATCATCAAGCACAAGATGGTCGACCAGATCAAGAGGGAGATTTCGATCATGAAGCTAGTTAGGCACCCTTATGTTGTTCGCCTGCACGAGGCATCACTTCTTTCTATTGTAAAACGCTTTTTTCTTCAGGTTCTTGCAAGCCGTACTAAGATTTATATTATATTGGAGTTCATCACGGGTGGTGAATTGTTTGATAAAATTATACACCATGGCCGCCTTAGTGAAGCTGATTCTAGAAGATATTTCCAACAGCTTATTGACGGTGTAGATTATTGCCACAGTAAGGGAGTTTATCACAGAGATTTAAAGCCTGAAAATCTTTTACTCAATTCACTAGGAAATATAAAGATTTCCGATTTTGGTTTGAGTGCATTTCCTGAGCAGGGGGTGAGTATCCTTCGGACAACTTGTGGGACTCCGAACTATGTGGCTCCTGAGGTACTCAGTCATAAGGGTTACAACGGTGCTGTGGCAGATGTTTGGTCCTGTGGGGTTATCCTCTTTGTCCTACTGGCTGGATATCTTCCTTTTGATGAGCTTGATCTAACCACCTTATATAAATTTAGGTTGTCGTTGATGCTGATGTTTTTTTCTTTCTTTCAGATTGAGAGAGCAGAGTTTTCATGCCCTTCTTGGTTTCCAGTGGGAGCAAAAATGTTGATACATAGAATTTTGGACCCAAATCCTGAAACTCGTATAACAATTGAGCAGATAAGAAATGATGAATGGTTTCAGAGGAGTTATGTTCCTGTCAGTCTTCTTGAGTATGAAGATGTAAATCTTGATGATGTAAATGCTGCTTTTGACGATGCTGAGGAACCAAGGGCTGATCAACAATGTGATAAGGAGGACATGGGTCCTCTAATGCTTAATGCATTTGACTTGATAATTTTGTCTCAAGGCTTAAATCTTGCAACAATCTTTGATCGTGGGCAGGACTCTGTGAAGTACCAAACCCGCTTTATCTCTCAAAAGCCAGCAAAAGTGGTTTTATCAAGTATGGAAGTTGTGGCACAATCAATGGGATTTAAGACGCATATTCGCAACTACAAGATGAGGGTAGAGGGTATTTCAGCAAATAAAACATCCTATTTCTCTGTCATCCTGGAAATTTTTGAAGTGGCTCCTACATTTTATATGGTAGACATTCAGAAAGCAGCTGGAGATACTGGTGAATACCTCAAGTTTTACAAGAACTTTTGTAGCAATCTTGAGGATATAATCTGGAAACCGCCTCATGAAGCAAGCAAATCAAGGATCTCCAAGACCAAAAGCAAGAGACGATAG 1419 0.413 MVVRKVGKYEIGRTIGEGTFAKVKFAQNTETGESVAMKVLDRSTIIKHKMVDQIKREISIMKLVRHPYVVRLHEASLLSIVKRFFLQVLASRTKIYIILEFITGGELFDKIIHHGRLSEADSRRYFQQLIDGVDYCHSKGVYHRDLKPENLLLNSLGNIKISDFGLSAFPEQGVSILRTTCGTPNYVAPEVLSHKGYNGAVADVWSCGVILFVLLAGYLPFDELDLTTLYKFRLSLMLMFFSFFQIERAEFSCPSWFPVGAKMLIHRILDPNPETRITIEQIRNDEWFQRSYVPVSLLEYEDVNLDDVNAAFDDAEEPRADQQCDKEDMGPLMLNAFDLIILSQGLNLATIFDRGQDSVKYQTRFISQKPAKVVLSSMEVVAQSMGFKTHIRNYKMRVEGISANKTSYFSVILEIFEVAPTFYMVDIQKAAGDTGEYLKFYKNFCSNLEDIIWKPPHEASKSRISKTKSKRR 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00818 472 SUPERFAMILY Protein kinase-like (PK-like) 6 301 IPR011009 -
Gma06g00818 472 Pfam NAF domain 331 389 IPR004041 GO:0007165
Gma06g00818 472 Gene3D Transferase(Phosphotransferase) domain 1 3 331 - -
Gma06g00818 472 CDD CIPK_C 335 450 - -
Gma06g00818 472 ProSiteProfiles Protein kinase domain profile. 9 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g00818 472 Gene3D Kinase associated domain 1, KA1 332 454 - -
Gma06g00818 472 PANTHER - 2 469 - -
Gma06g00818 472 SMART serkin_6 9 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g00818 472 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 2 469 - -
Gma06g00818 472 ProSiteProfiles NAF domain profile. 329 353 IPR018451 GO:0007165
Gma06g00818 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Gma06g00818 472 Pfam Protein kinase domain 9 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g00818 472 ProSitePatterns Protein kinases ATP-binding region signature. 15 47 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00818 Gma-Chr6 7537234 7542366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00818 1 414 CBL-interacting serine-threonine protein kinases AT4G24400 77.295 0.0 656
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gma06g00818 Pkinase 2.4e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00818 - - gmx:100813117 848.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00818 06 7537234 7542366 Gma06g00818 06 7537234 7542366 ECH
Gma04g00828 04 8081755 8087528 Gma06g00818 06 7537234 7542366 GST