Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00801 ATGAACCACCCCTTCATCACCCTCTTCACTACCATCATACTCATCATCATTTCCACCACCAGAGCCTCCCTCTCCCTGAATCAGTCACAGTTTTTCTCTCTGATGAAGGACTCTCTCTCGGGGAAATACCCCACGAATTGGGACGCTGCAGGGGAAGTAGTACCAATATGCGGCTTCACCGGAGTCACCTGCAACACCAAAGGTGAAGTTATCAACCTCGACCTCTCAGGTTTGTCATCACTCTCTGGAAAGTTCCCACCAGATATATGCTCTTACCTCCCACAATTACGCGTTCTCCGCCTCGGCCACACCAGGCTCAAGTTCCCCATAGACACCATCCTCAACTGTTCCCACTTGGAAGAGCTTAACATGAACCACATGTCCTTAACCGGCACCCTCCCAGATTTTTCTTCCTTGAAAAAATCCATCAGGATTCTCGACTTGTCCTACAACAGCTTCACAGGCCAGTTCCCCATGTCGGTTTTCAACCTCACCAACCTCGAGGAGCTTAACTTCAACGAAAACGGAGGCTTCAATCTGTGGCAGTTACCTACGGATATCGACAGGTTGAAAAAACTTAAGTTTATGGTGCTCACAACGTGCATGGTGCATGGCCAAATCCCTGCCTCCATAGGGAACATAACATCCCTCATCGATCTTGAGCTGAGTGGGAATTTCCTCACGGGACAAATTCCCAAAGAGCTTGGTCAGCTGAAGAATTTACAGCAACTTGAGCTTTACTATAACTACCACCTCGTTGGGAACATACCAGAGGAGTTGGGGAACCTCACGGAGCTCGTGGATTTGGATATGTCGGTGAACAAGTTCACCGGGAGCATCCCTGCGTCGGTGTGCAAGCTTCCGAAGCTTCAAGTGTTGCAGCTCTACAACAACAGCCTCACCGGAGAAATCCCAGGTGAGATTGAAAACTCAACAGCTATGAGAATGTTGTCTCTCTACGACAACTTCCTCGTAGGACATGTTCCCGCGAAACTGGGACAGTTCTCTGGGATGGTGGTTCTTGATTTGTCGGAGAACAAGTTTTCTGGACCGTTGCCAACCGAGGTTTGCAAGGGAGGTACACTCGAGTACTTTCTCGTTCTTGATAACATGTTTTCTGGTGAGATACCACACAGTTATGCGAACTGCATGGTGCTGTTGAGGTTTAGAGTCAGCAACAACCGTTTGGAGGGGTCCATTCCCGCTGGACTCCTCGGTTTGCCACACGTTTCAATCATTGATTTGAGTAGCAACAACTTTACCGGTCCGGTTCCTGAGATTAACGGAAATTCTAGAAATTTATCTGAGCTGTTCCTCCAGAGGAACAAGATTTCAGGTGTCATAAATCCCACAATATCAAAAGCCATTAACTTGGTCAAGATTGATTTCAGCTATAACCTTTTGTCTGGTCCAATCCCTGCCGAAATTGGCAACCTCAGAAAGCTTAATTTGCTTATGTTGCAAGGGAACAAGCTGAGTTCTTCCATCCCCGGTTCACTATCTTCATTGGAGTCTCTCAACCTTCTTGATCTCTCCAATAATCTTTTAACTGGAAGCATCCCTGAAAGCCTCTCTGTGCTGTTACCAAACTCTATTAACTTCTCACACAACCTGCTTTCGGGTCCAATTCCTCCCAAACTGATCAAAGGGGGTTTGGTGGAAAGCTTTGCAGGGAATCCAGGTTTGTGTGTTTTACCTGTGTATGCTAATTCATCGGATCAAAAGTTTCCTATGTGTGCAAGTGCCCACTACAAGAGTAAGAAGATAAACACAATCTGGATAGCAGGGGTGTCAGTGGTTTTGATCTTTATTGGCTCTGCCTTGTTTCTCAAACGTTGGTGCAGCAAAGACACTGCTGCAGTCGAACATGAGGACACGCTGTCTTCTTCGTACTTCTATTATGATGTTAAGAGCTTCCACAAGATCTCTTTTGACCAAAGGGAGATAATTGAGTCCTTGGTGGACAAGAACATAATGGGACATGGAGGGTCTGGGACTGTGTACAAGATTGAGTTGAAGAGTGGTGATATTGTTGCAGTGAAGAGGCTGTGGAGTCACTCGTCGAAGGATTCGGCTCCGGAGGATCGGTTATTTGTGGACAAGGCATTGAAAGCAGAGGTGGAGACCCTGGGAAGCGTAAGACACAAGAACATTGTGAAACTGTACTGCTGCTTCTCAAGTTATGACTTCAGCTTGTTGGTTTATGAGTACATGCCAAATGGTAATCTTTGGGATTCCCTGCATAAAGGTTGGATCCTTTTGGATTGGCCTACTCGTTATAGAATTGCACTGgggattgcacagggtttggcatacctccatcatgatttgcttcttcctattatccaccgagatatcaagtcaactaatatcctgttggatgttgattaccagcccaaggttgcagactttgggattgccAAGGTTTTGCAAGCAAGAGGAGGGAAGGATTCCACAACAACTGTTATTGCAGGAACATATGGTTACTTAGCCCCAGAATTTGCATATTCATCAAGGGCCACCACCAAGTGCGATGTCTACAGTTTTGGGGTGATTTTGATGGAACTGTTAACTGGGAAGAAGCCCGTTGAGGCAGAATTTGGAGAAAACAGAAACATTGTTTTCTGGGTTTCCAACAAAGTAGAAGGCAAGGAAGGGGCTAGACCAAGTGAGGTATTAGATCCAAAGTTGTCGTGTTCATTCAAGGAAGACATGGTCAAAGTGTTGCGGATTGCTATTCGCTGCACCTACAAAGCCCCAACAAGTAGACCAACCATGAAGGAGGTTGTCCAGCTTCTGATTGAGGCAGAGCCACGAGGTTCCGATTCTTGCAAGTTGTCAACCAAAGATGTATCAAATGTCACCGTAATAAAGAAACCATACGAGTTATAA 2892 0.4402 MNHPFITLFTTIILIIISTTRASLSLNQSQFFSLMKDSLSGKYPTNWDAAGEVVPICGFTGVTCNTKGEVINLDLSGLSSLSGKFPPDICSYLPQLRVLRLGHTRLKFPIDTILNCSHLEELNMNHMSLTGTLPDFSSLKKSIRILDLSYNSFTGQFPMSVFNLTNLEELNFNENGGFNLWQLPTDIDRLKKLKFMVLTTCMVHGQIPASIGNITSLIDLELSGNFLTGQIPKELGQLKNLQQLELYYNYHLVGNIPEELGNLTELVDLDMSVNKFTGSIPASVCKLPKLQVLQLYNNSLTGEIPGEIENSTAMRMLSLYDNFLVGHVPAKLGQFSGMVVLDLSENKFSGPLPTEVCKGGTLEYFLVLDNMFSGEIPHSYANCMVLLRFRVSNNRLEGSIPAGLLGLPHVSIIDLSSNNFTGPVPEINGNSRNLSELFLQRNKISGVINPTISKAINLVKIDFSYNLLSGPIPAEIGNLRKLNLLMLQGNKLSSSIPGSLSSLESLNLLDLSNNLLTGSIPESLSVLLPNSINFSHNLLSGPIPPKLIKGGLVESFAGNPGLCVLPVYANSSDQKFPMCASAHYKSKKINTIWIAGVSVVLIFIGSALFLKRWCSKDTAAVEHEDTLSSSYFYYDVKSFHKISFDQREIIESLVDKNIMGHGGSGTVYKIELKSGDIVAVKRLWSHSSKDSAPEDRLFVDKALKAEVETLGSVRHKNIVKLYCCFSSYDFSLLVYEYMPNGNLWDSLHKGWILLDWPTRYRIALGIAQGLAYLHHDLLLPIIHRDIKSTNILLDVDYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEFAYSSRATTKCDVYSFGVILMELLTGKKPVEAEFGENRNIVFWVSNKVEGKEGARPSEVLDPKLSCSFKEDMVKVLRIAIRCTYKAPTSRPTMKEVVQLLIEAEPRGSDSCKLSTKDVSNVTVIKKPYEL 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00801 963 Gene3D Phosphorylase Kinase; domain 1 636 737 - -
Gma06g00801 963 SUPERFAMILY L domain-like 293 546 - -
Gma06g00801 963 SUPERFAMILY L domain-like 70 374 - -
Gma06g00801 963 SUPERFAMILY Protein kinase-like (PK-like) 638 933 IPR011009 -
Gma06g00801 963 SMART LRR_typ_2 214 238 IPR003591 -
Gma06g00801 963 SMART LRR_typ_2 93 116 IPR003591 -
Gma06g00801 963 SMART LRR_typ_2 287 311 IPR003591 -
Gma06g00801 963 SMART LRR_typ_2 479 502 IPR003591 -
Gma06g00801 963 SMART LRR_typ_2 164 190 IPR003591 -
Gma06g00801 963 SMART LRR_typ_2 503 527 IPR003591 -
Gma06g00801 963 Gene3D Ribonuclease Inhibitor 27 179 IPR032675 -
Gma06g00801 963 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 8 944 - -
Gma06g00801 963 Gene3D Ribonuclease Inhibitor 180 282 IPR032675 -
Gma06g00801 963 SMART serkin_6 653 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g00801 963 Gene3D Transferase(Phosphotransferase) domain 1 738 956 - -
Gma06g00801 963 Gene3D Ribonuclease Inhibitor 287 574 IPR032675 -
Gma06g00801 963 Pfam Protein kinase domain 655 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g00801 963 PANTHER RECEPTOR PROTEIN-TYROSINE KINASE CEPR1 8 944 - -
Gma06g00801 963 ProSitePatterns Serine/Threonine protein kinases active-site signature. 781 793 IPR008271 GO:0004672|GO:0006468
Gma06g00801 963 ProSiteProfiles Protein kinase domain profile. 653 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00801 Gma-Chr6 7295320 7298891 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00801 28 940 Receptor kinase-like Gene Family AT5G49660 65.213 0.0 1206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gma06g00801 Pkinase 1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00801 - - gmx:100808284 1843.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00801 06 7295320 7298891 Gma06g00801 06 7295320 7298891 ECH
Gma04g00807 04 7739358 7743169 Gma06g00801 06 7295320 7298891 GST