Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00767 ATGATGGCGGTGAGTTCAGCCTGCAAAGATGGGAGCAAGGTGGCACTGGACAACGGCAAGTACGTTAGGTACACACCTGAACAGGTGGAAGCACTGGAGAGGCTCTACCATGAATGTCCAAAACCAAGTTCTCTTCGCCGTCAACAACTCATCAGAGAGTGTCCCATTCTCTCCAACATCGAACCCAAACAGATCAAGGTTTGGTTCCAAAACCGAAGGTGCAGAGAGAAGCAGCGGAAAGAAGCGTCACGGCTGCAAGCTGTGAACAGGAAGCTAACAGCAATGAATAAATTACTGATGGAGGAAAACGACAGATTGCAGAAGCAGGTGTCACACCTCGTCTATGAAAACAGCTTTTTCCGCCAACAGACACACAACAACAACGCTACGCTTGCCACAACAGACACAAACACAAGCTGTGAGTCGGTGGTGACGAGTGGTCAGCGGAACTTGACACCGCAGCAGCATCCACCGAGGGATGCTAGCCCTGCAGGACTTTTGTCCATTGCAGAGGAGACTTTAGCAGAGTTTCTTTCAAAGGCCACTGGAACTGCTGTCGAGTGGGTCCAAATGCCTGGGATGAAGCcTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCACGGTTGCCCTGGAGTGGCTGCACGTGCTTGCGGCCTTGTGGGTCTAGAACCTACCAGGGTTGCCGAAATCCTCAAAGATAGGCTCTCATGGTTTCGTGATTGCCGAACTGTGGATGTTCTAAATGTGATGTCCACTGGAAATGGTGGAACTATTGAGCTGCTTTACATGCAGTTGTATGCGCCAACAACTTTGGCACCTGGTCGTGACTTCTGGTTGCTGCGTTACACATCACTTTTGGAGGACGGTAGTTTTGTGGTCTGTGAAAGATCACTTAACAACACTCAGAATGGTCCTGCTATGCCCCCAGTGCAGCATTTTGTTAGAGCAGACATGCTGCCAAGCGGGTATTTGATAAGACCCTGCGAAGGAGGGGGATCCATTATTCATATTGTCGATCATATGGTTCTAGAGCCCTGGAGTGTACCTGAAGTTTTGCGCCCACTGTATGAGTCATCAATGCTGCTAGCTCAAAGGACAACTATGGCGGCCTTACGTCATTTGAGGCAAATTTCTCAAGAGGTTTCTCAGCCAAGTGTAACTGGATGGGGAAGAAGGCCTGCAGCTTTGCGTGCACTGAGTCAGAGATTGAGCAAGGGCTTTAATGAAGCAGTCAATGGGTTTGCAGATGATGGCTGGTCCATGTTAGAGAGTGATGGCATTGATGATGTCACCCTTCTTGTGAATTCCTCACCTAGCAAGATGATGGGAGTTAGCCTTGTCTATAACAACAATGGATTTCCTTCTGTGAGCAGTTCTGTGCTATGTGCCAAAGCATCCATGTTGCTGCAGAATGTCCCTCCAGCAATTCTTCTTAGATTCTTGCGGGAGCACCGATCAGAATGGGCAGACAGCAGTATTGATGCTTACTCAGCTGCTGCCATCAAAGCTGGTCCCTGTAGCTTGCCAGGGGCCCGATCAGGAGGTTTTGGCGGTCAGGTTATTCTTCCACTAGCTCACACAATTGAGCATGAAGAGGCaagttatttgTTCATGGAGGTTATCAAGCTTGAAAACATGGGCTACTATAGGGACGACATGAGTATACCTGGTGATGTTTTCCTCTTGCAACTTTGCAGTGGAGTGGATGAGCATGCGGTTGGCACCAGTGCAGAACTTGTTTTTGCTCCAATTGACGCATCTTTCTCTGATGATGCACCCATTTTACCTTCTGGTTTTCGCATCATACCTCTAGATTCTGGCACAGATGCTGCTAGTCCAAACCGTACACTTGATTTGGCTTCTGCACTTGAGGTTGGCACAACAGCAAACAAAGCAGCTAGTGACAACTCAGCTCATTCTGGGAGCACAAAGTCTGTGATGACAATAGCATTCCAGTTTGCATTCGAAGTTCACCTTCAAGAGAACATAGCAACCATGGCCAGGCAATATGTTCGTAGCATCATTGCATCTGTTCAGAGGGTTTCATTAGCACTTTCTCCTTCGCGCTTTGGTTCTCACAATGCTTTTCACTTACCACCTGGCACTCCTGAGGCACAAACACTTGCTCGATGGATCTGTAACAGCTATCGGTTCTATCTTGGGGTAGAACTTCTAAAATGTGAAGGCAGTGAGTCCATTCTCAAGTCTCTTTGGCATCACTCGGATGCAGTTTTGTGCTGCTCTTTAAAGGCATTACCCGTTTTCACGTTTGCAAATCAAGCTGGACTTGACATGCTTGAGACAACTTTGGTTGCACTTCAAGACATCACTCTGGAAAAGATTTTTGATGACAATGGAAAGAAAACTCTGTGCACTGAGTTCCCCCAGATAATGCAGCAGGGTTTCATGTGTATTCAAGGTGGTATCTGTTTATCCAGCATGGGAAGGCCAGTGTCCTATGAGAGAGCAGTTGCATGGAAAGTGTTAAACGAAGAAGAATCCGCCCATTGCATCTGTTTTATGTTCATCAATTGGTCCTTTGTCTAA 2550 0.4733 MMAVSSACKDGSKVALDNGKYVRYTPEQVEALERLYHECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENSFFRQQTHNNNATLATTDTNTSCESVVTSGQRNLTPQQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCPGVAARACGLVGLEPTRVAEILKDRLSWFRDCRTVDVLNVMSTGNGGTIELLYMQLYAPTTLAPGRDFWLLRYTSLLEDGSFVVCERSLNNTQNGPAMPPVQHFVRADMLPSGYLIRPCEGGGSIIHIVDHMVLEPWSVPEVLRPLYESSMLLAQRTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSKGFNEAVNGFADDGWSMLESDGIDDVTLLVNSSPSKMMGVSLVYNNNGFPSVSSSVLCAKASMLLQNVPPAILLRFLREHRSEWADSSIDAYSAAAIKAGPCSLPGARSGGFGGQVILPLAHTIEHEEASYLFMEVIKLENMGYYRDDMSIPGDVFLLQLCSGVDEHAVGTSAELVFAPIDASFSDDAPILPSGFRIIPLDSGTDAASPNRTLDLASALEVGTTANKAASDNSAHSGSTKSVMTIAFQFAFEVHLQENIATMARQYVRSIIASVQRVSLALSPSRFGSHNAFHLPPGTPEAQTLARWICNSYRFYLGVELLKCEGSESILKSLWHHSDAVLCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDNGKKTLCTEFPQIMQQGFMCIQGGICLSSMGRPVSYERAVAWKVLNEEESAHCICFMFINWSFV 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00767 849 PANTHER CLASS III HD-ZIP PROTEIN CNA1 5 849 - -
Gma06g00767 849 ProSiteProfiles 'Homeobox' domain profile. 15 79 IPR001356 GO:0003677
Gma06g00767 849 SMART START_1 168 378 IPR002913 GO:0008289
Gma06g00767 849 SUPERFAMILY Homeodomain-like 19 83 IPR009057 -
Gma06g00767 849 Coils Coil 75 109 - -
Gma06g00767 849 Pfam START domain 169 377 IPR002913 GO:0008289
Gma06g00767 849 Gene3D - 203 384 IPR023393 -
Gma06g00767 849 CDD homeodomain 20 80 IPR001356 GO:0003677
Gma06g00767 849 SMART HOX_1 17 83 IPR001356 GO:0003677
Gma06g00767 849 MobiDBLite consensus disorder prediction 141 161 - -
Gma06g00767 849 Pfam MEKHLA domain 708 848 IPR013978 -
Gma06g00767 849 CDD START_ArGLABRA2_like 163 378 - -
Gma06g00767 849 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 5 849 IPR044830 GO:0003700
Gma06g00767 849 Pfam Homeodomain 20 78 IPR001356 GO:0003677
Gma06g00767 849 Gene3D - 12 86 - -
Gma06g00767 849 MobiDBLite consensus disorder prediction 141 157 - -
Gma06g00767 849 CDD bZIP 72 111 - -
Gma06g00767 849 ProSiteProfiles START domain profile. 159 387 IPR002913 GO:0008289
Gma06g00767 849 SUPERFAMILY Bet v1-like 168 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00767 Gma-Chr6 6960787 6966306 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00767 16 849 Homeobox Transcription Factor Family AT4G32880 79.714 0.0 1382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Gma06g00767 START 9.7e-52 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00767 K09338 - gmx:100797291 1678.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00767 06 6960787 6966306 Gma06g00767 06 6960787 6966306 ECH
Gma04g00774 04 7324994 7330969 Gma06g00767 06 6960787 6966306 GST