Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00749 ATGTGTAACACCCTCAAGTTCAACCCCTTTAAGAACCGTTTGCTAATAATGTTCATGCTGGTTCTTTCTCTCCCCTTCAATGTTCAATCCCAAGCCAAAGATAGTGAAGAACAGAACCTGGCAGAACTCCCTCAAACGGTTCATCCAAGCAAGGGAATAGTAATAGCAGTTCTCTCCACAATGTTTGCCATAACATTACTCTTACTTCTCTATGTTAAATTCTGCCGAACTATCCCTCATGAACTCCTTAGGCAAAACTCAAATCTCCAAAACTTTCAGGGTCTAACTCGATCAAGGTCTAGATTTTCTGGGATTGACAAACAAGTAGTTGAAACACTTCCTTTCTTCAAGTTCTCTTCCCTCAAGGGTTCCAAAGAAGGCCTAGAATGCACCGTTTGTCTCTCCAAATTCGAGGACACAGAGACTCTAAGACTTCTTCCAAAGTGCAAGCACGCTTTCCACATGAATTGCATTGACAAGTGGTTTGAAAGCCACTCTACGTGCCCTCTTTGTAGACGCAGGGTTGAAGCAGGGGACATTAAAAACCTCAACTTTTCATTAAGCTCGCGGTTCCTCCGAGTTCCTTCAAATCTCACGGAGGATCCAAACCTTGAAATCTTTGTTCACAGAGAGCCATCTCATGGAGGTTCAGCATCGATCCAAAGGTCATATTTACCCTTAGACCAGCGGTGTCGAGGATCATCGAGAAGAGGCTTTTGGGACGTGGGCAAGTGCAAGAAACAAGAACTACTGCTTATTGATGATAGCAGTTCTATTGGTGGGACAAGAAAGTGGAACAAACCGGTGCACGTGATGAATCATAAGATAGTTATCTCTAATGTTTTTACGAGGAGCAGGTGGAGTGATCTTAATGCTTCGGACCTGTTGTCATTGAACAGTGAGATGCTTAATGATGTTTGCAGTAGGAGATTCTGTTTGTGTCCTTTGGAATCCAGCGACGACAGCGGAAATTTTCATGGGATTTCGAGTTCTAATGAGGAAGAAAACTCGTTTACGGCACTGAATAGTCCTGCGGAGAAGAGGTGCATGTCTGAGAGGTTTACACAAAAGGGGAAGGAGAATAGGATCAGAGAATGTGTGACATCTAATGGGGCCAGTGAGAGGCTGTGGAAGGTTTGGTTGCCAATTGCGCGAAGAACGGTCCAATGGTTTGCGATACAAGAAAGGAATTCGGTTGAATTAGAACACAAAACCTTAGCTTCAAATGTCTGA 1233 0.4371 MCNTLKFNPFKNRLLIMFMLVLSLPFNVQSQAKDSEEQNLAELPQTVHPSKGIVIAVLSTMFAITLLLLLYVKFCRTIPHELLRQNSNLQNFQGLTRSRSRFSGIDKQVVETLPFFKFSSLKGSKEGLECTVCLSKFEDTETLRLLPKCKHAFHMNCIDKWFESHSTCPLCRRRVEAGDIKNLNFSLSSRFLRVPSNLTEDPNLEIFVHREPSHGGSASIQRSYLPLDQRCRGSSRRGFWDVGKCKKQELLLIDDSSSIGGTRKWNKPVHVMNHKIVISNVFTRSRWSDLNASDLLSLNSEMLNDVCSRRFCLCPLESSDDSGNFHGISSSNEEENSFTALNSPAEKRCMSERFTQKGKENRIRECVTSNGASERLWKVWLPIARRTVQWFAIQERNSVELEHKTLASNV 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00749 410 SMART ring_2 130 171 IPR001841 -
Gma06g00749 410 CDD RING-H2_EL5_like 129 172 - -
Gma06g00749 410 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 104 180 IPR013083 -
Gma06g00749 410 Pfam Ring finger domain 129 172 IPR001841 -
Gma06g00749 410 ProSiteProfiles Zinc finger RING-type profile. 130 172 IPR001841 -
Gma06g00749 410 SUPERFAMILY RING/U-box 109 176 - -
Gma06g00749 410 PANTHER RING-H2 FINGER PROTEIN ATL4J 22 405 - -
Gma06g00749 410 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 22 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00749 Gma-Chr6 6780885 6782271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00749 39 397 C3H Transcription Factor Family AT2G20030 38.684 1.55e-68 220
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00759 04 7135412 7139670 Gma06g00749 06 6780885 6782271 GST