Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00711 ATGGTATCTGTCGAAAAAATTCACATGGAAAGGGAACGAACACGGAAACGCCCTCGTCTCGCGTGGGACGTAGCTCCTCCCTCCGCGTCTGAGGCACAACGGGCTCTGCCGGTGCCCGGTGATGAAGGTTTCGAAAGAAAGCATGTTTCGCCTCCGAAAAGGGACGACGATCGAGAGGGCCATTATGTCTTCAATCTTGGCGAAAATCTCACTCCTAGATATAAAATCCTCGGCAAGATGGGTGAAGGCACATTTGGTCGGGTTTTGGAATGTTGGGACCGTCAAACCAGAGAATATGTGGCTATCAAGGTAGTTAGAAGCATACGGAAATATCGGGATGCAGCAATGCTCGAGATTGATGTGCTTCAACAACTAGCGAAGAATGATAGAGGAAGCTCGCGATGCGTGCAGATCAGAAATTGGTTTGATTACCGAAATCACATATGCATTGTCTTTGAGAAGCTTGGACCAAGCTTATTTGATTTTCTAAAGAGAAATAAATACTGCCCATTCCCTGTGGATCTTGTTCGGGAATTTGGACGTCAGCTTTTGGAATCTGTAGCATATATGCATGAACTACGCCTAATCCACACTGACCTAAAGCCAGAAAATATACTTCTTGTTTCCTCTGAATATGTAAAGCTCCCTAGCTATAAGAGAATTTCCTCAGATGAAATGCAATTCAGGTGCTTGCCCAAGTCTAGTGCTATTAAGCTGATTGATTTTGGTAGTACTGCATATGATAATCAGAATCATAGCTCCATTGTTTCTACAAGGCATTACAGAGCTCCCGAGATTATTCTAGGTCTAGGATGGTCATATCCATGTGATTTGTGGAGTGTTGGATGTATTCTCATCGAACTATGCTCGGGTGAAGCATTGTTTCAGACTCATGAAAACTTGGAGCACCTGGCAATGATGGAAAGAGTTTTGGGACCTATTCCAGAGCATATGATTTGCAGGTCTAACAAGGGTGCAGAAAAATATTTCAAGCGAGGATCGCGACTAAGATGGCCTGAAGGAGCTGTTTCAAGGGAGAGCATTAGTGCAGTGAAGAAGCTTGGTCATCTTAAGGATATTGTATCACGAAATGTGGACTCTTCAAGGTCCTCCTTGACTGAATTGTTACATGGCTTATTAACATATGATCCTACCAAACGCATTACAGCTCGCCAAGCCCTCGATCATCCCTTCTTTAGGAATCCTACTACTTAG 1215 0.4395 MVSVEKIHMERERTRKRPRLAWDVAPPSASEAQRALPVPGDEGFERKHVSPPKRDDDREGHYVFNLGENLTPRYKILGKMGEGTFGRVLECWDRQTREYVAIKVVRSIRKYRDAAMLEIDVLQQLAKNDRGSSRCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHELRLIHTDLKPENILLVSSEYVKLPSYKRISSDEMQFRCLPKSSAIKLIDFGSTAYDNQNHSSIVSTRHYRAPEIILGLGWSYPCDLWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPEHMICRSNKGAEKYFKRGSRLRWPEGAVSRESISAVKKLGHLKDIVSRNVDSSRSSLTELLHGLLTYDPTKRITARQALDHPFFRNPTT 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00711 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Gma06g00711 404 Gene3D Transferase(Phosphotransferase) domain 1 128 399 - -
Gma06g00711 404 MobiDBLite consensus disorder prediction 40 58 - -
Gma06g00711 404 CDD PKc_CLK 61 399 - -
Gma06g00711 404 MobiDBLite consensus disorder prediction 1 20 - -
Gma06g00711 404 PANTHER BNAA07G37640D PROTEIN 49 400 - -
Gma06g00711 404 MobiDBLite consensus disorder prediction 1 58 - -
Gma06g00711 404 Pfam Protein kinase domain 74 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g00711 404 Gene3D Phosphorylase Kinase; domain 1 61 154 - -
Gma06g00711 404 SUPERFAMILY Protein kinase-like (PK-like) 61 401 IPR011009 -
Gma06g00711 404 SMART serkin_6 74 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g00711 404 ProSiteProfiles Protein kinase domain profile. 74 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g00711 404 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 49 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00711 Gma-Chr6 6436554 6440222 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00711 73 401 Core Cell Cycle Gene Families AT3G48750 27.679 9.53e-29 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Gma06g00711 Pkinase 7.5e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00711 K08287 - gmx:100782453 823.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00711 06 6436554 6440222 Gma06g00711 06 6436554 6440222 ECH
Gma04g00721 04 6712772 6716419 Gma06g00711 06 6436554 6440222 GST