Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00706 ATGCAAAAGGAAAAGGAAGCAATTGTCAAGGAGGGGACTACGGAAATAGAAATGGAAGGAACCCGTGCAAAAGAGGAAACCCTACCACCGGGATTTCGATTTCACCCTACCGATGAAGAACTTGTCACATGCTATCTGGTAAATAAGATATCGGATTCTAATTTTACAGGGAGAGCAATAACTGATGTAGATCTCAACAAATGTGAGCCATGGGAGCTGCCAGGGAAGGCAAAGATGGGAGAAAAagaatggtacttcttcagtctgagagaccgtaaatacccaacgggtgtgagaacaaatcgagcaactaacgccgggtattggaagaccacagggaaagacaaggagatcttcaacagtgaaacatcggagttgattggcatgaagaagactttagttttctacaaaggcagagctcccagaggagaaaaaagcaactgggtcatgcatgaatatCGCATTCACTCAAAATCCAGCTATAGAACTAACAGGCAGGATGAATGGGTGGTGTGCCGGGTATTCAAGAAAAGTGGTAATGCGAAGAAGTACCCTTCTTCCAACCATGCAAGAGCAGTGAATCCATACAGCTTGGAAATAGAACCAAATATTTTGCCTCCGCTAATGATGCAACTGGGAGATCCTGGTGCTCATTTCCTTTATGGAAGAAACTACATGAACAGTGCTGAGTTAGCAGAACTTGCTAGGGTTTTGAGAGGGGGTGGATCAACCAGTAGTGTCAACCTGCCAATTCAATCCCACTTGAGCTACCCTACATCATCATCGACAGGAGGAGGATTCACCATTTCAGGGCTCAATTTGAACCTTGGAGGAGGAGGAGCAACAGCCACAACACAACCCATTTTAAGGCCAATGCAACCTTCTCCTGCTCCTGTTCATACGATGGCTCAAGTACTTGATGCCAATTCCAGCATGATGACAACCAGTTCTCTTGGTGCTGAGAATGTAGGTTATGGAGCAGAAATGAGTAACTTGAATTTGCATGGGAATAGGTATATGGGCGTCGATCACTGCATGGATCTAGACAACTATTGGCCTTCCTACTAA 1068 0.3596 MQKEKEAIVKEGTTEIEMEGTRAKEETLPPGFRFHPTDEELVTCYLVNKISDSNFTGRAITDVDLNKCEPWELPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNAGYWKTTGKDKEIFNSETSELIGMKKTLVFYKGRAPRGEKSNWVMHEYRIHSKSSYRTNRQDEWVVCRVFKKSGNAKKYPSSNHARAVNPYSLEIEPNILPPLMMQLGDPGAHFLYGRNYMNSAELAELARVLRGGGSTSSVNLPIQSHLSYPTSSSTGGGFTISGLNLNLGGGGATATTQPILRPMQPSPAPVHTMAQVLDANSSMMTTSSLGAENVGYGAEMSNLNLHGNRYMGVDHCMDLDNYWPSY 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00706 355 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 352 - -
Gma06g00706 355 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 13 352 - -
Gma06g00706 355 ProSiteProfiles NAC domain profile. 28 177 IPR003441 GO:0003677|GO:0006355
Gma06g00706 355 SUPERFAMILY NAC domain 21 177 IPR036093 GO:0003677|GO:0006355
Gma06g00706 355 Gene3D NAC domain 37 182 IPR036093 GO:0003677|GO:0006355
Gma06g00706 355 Pfam No apical meristem (NAM) protein 29 155 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00706 Gma-Chr6 6417433 6420223 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00706 22 355 NAC Transcription Factor Family AT2G24430 54.023 1.87e-112 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma06g00706 NAM 2.9e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00706 - - gmx:100804931 706.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00706 06 6417433 6420223 Gma06g00706 06 6417433 6420223 ECH
Gma04g00718 04 6689182 6692078 Gma06g00706 06 6417433 6420223 GST