Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00687 ATGGTGTTGAAAACTCACAGGTTCGCCAATGATGAAAAACACACTCTTGAACCTCTTTGGGAAAAGATAGATGCTCACAAACACCATGAGAAGGCATTCCATGTCTACCCAGAATTCAAAATTAGTAATGGTGAAAAGAACAGAATGAGTATCAAAATTCCCTCGCTTGAAAAGTTGAAGGTTTTCCCAGAGAAACACGAGCCATGGAAGAAGAGAATTCTTGATCCTGGCAGTGATGTCATTTTGGAGTGGAACCGGGCTTTCCTGTTTGCTTGCATTCTAGCACTTTTTGTTGATCCACTCTTTTTCTACCTCCCCTCAGTAGCAAATGATGGCAAGTCATTGTGTATGGCCACTGATTTGAATTTAGGAATTGTTGTGACGTGTTTCCGGACATTTGCTGATGTTTTCTATCTACTCAACATGGCCATCAAGTTCAGAACTGCCTATGTGTCTCCAAGTTCAAGGGTTTTTGGCAGGGGAGAGCTTGTTATGGATCCTAGGCTGATTGCAAGGCGGTATTTGAGATCAGAGTTCTTCCTAGATCTTGTTGCTACATTGCCTCTTCCCCAGATTGTGATTTGGTTTATTATGCCAGCAATTAGAAGCTCCCATGCTGATCATACCAACAATGCACTTGTACTGATTGTTCTGCTTCAATATGTCCCCAGATTGTATATGATTTTCCCATTAAGCTCTCAGATTATTAAAACCACCGGTGTGGTTACAAAGACAGCTTGGGCTGGAGCTGCTTACAATCTTCTACTTTACATGTTAGCTAGTCATGTTTTGGGTGCATCCTGGTACTTGTTATCAATTGAAAGGCATGCTACTTGCTGGAAATCCGAATGCAGAAATGAAAGCCTCCCTGTGAAATGTGCTCTTAAGTACTTAGATTGCAGTACTTTAAACCACGATGATCGCATGAAGTGGGTAAACACTACTTCTGTGTTTGGTAACTGCAATCCCGAAAGTAGCACCAGTTTCAACTATGGAATTTTTGGAAATGCAGTGGAAAATAATGTTGTCTCCTCTGCATTTGTAGAGAAGTATCTCTATTGTCTGTGGTGGGGCTTGCAGAACTTAAGTTCCTATGGCCAGAGTTTGACTACAAGCACATTCGTTTGGGAAACTGCATTTGCAATACTCATAGCTATTCTGGGTCTGGTTCTGTTTGCCCACTTAATTGGTAACATGCAGACCTATTTGCAATCCATTACTGTGAGGCTTGAAGAGTGGAGGCTCAAGCGACGTGACACTGAAGAGTGGATGAGCCATCGCCAGCTCCCACAAAATCTCAGAGAGCGTGTCCGAAGATTTGTTCAGTACAAGTGGCTTGCAACTCGCGGGGTTGATGAAGAAACAATCCTGCGTGGCCTTCCTACTGACCTACGTAGAGATATCCAACGCCACCTTTGCTTGGACCTTGTTCGACGTGTTCCCTTTTTCTCACAAATGGATGATCAGCTACTTGATGCAATATGTGAGAGATTGGTATCATCATTGAGTACTCAAGGCACGAACATAGTTAGAGAAGGAGACCCGGTTACAGAGATGCTTTTCATCATCAGAGGGAGACTTGAAAGCTCAACCACAAATGGAGGCAGAACTGGTTTCTTCAACTCCATTACTTTGAGGCCTGGTGATTTCTGTGGAGAAGAGTTACTTGCTTGGGCATTGCTTCCAAAATCCACTCTTAACTTGCCTTCTTCTACAAGAACTGTTAAGGCCCTTGTGGAAGTGGAAGCCTTTGCACTAAGAGCAGAAGATCTTAAATTTGTGGCCAACCAGTTCCGACGTCTCCACAGCAAGAAGTTGCAGCACACTTTCCGTTTCTACTCTCACCATTGGAGGACATGGGCAGCGTGCTTCATTCAGGCTGCGTGGCGCCGGTTCAAGAAGAGAATGCTGACAAAGAGCCTTAGCTTGAGGGAATGCCAGTCCTTCAATCACGACGAACAAGTCGGGGATGAAATGGAACATGGGGAAGAAGAGCACAGTGCAGTGACTTCAAACACTGCACAAGTGAAACAGAACCTAGGTGTCACTATACTTGCTTCAAGATTTGCTGCAAACACAAGGAGAGGGGTTCAGAAGATTAAGGATGTAGAGTTGCCCAAGTTTCAAAAGCCTGAAGAGCCAGACTTTTCAGTAGAGCCTGATGATGGATAA 2172 0.4397 MVLKTHRFANDEKHTLEPLWEKIDAHKHHEKAFHVYPEFKISNGEKNRMSIKIPSLEKLKVFPEKHEPWKKRILDPGSDVILEWNRAFLFACILALFVDPLFFYLPSVANDGKSLCMATDLNLGIVVTCFRTFADVFYLLNMAIKFRTAYVSPSSRVFGRGELVMDPRLIARRYLRSEFFLDLVATLPLPQIVIWFIMPAIRSSHADHTNNALVLIVLLQYVPRLYMIFPLSSQIIKTTGVVTKTAWAGAAYNLLLYMLASHVLGASWYLLSIERHATCWKSECRNESLPVKCALKYLDCSTLNHDDRMKWVNTTSVFGNCNPESSTSFNYGIFGNAVENNVVSSAFVEKYLYCLWWGLQNLSSYGQSLTTSTFVWETAFAILIAILGLVLFAHLIGNMQTYLQSITVRLEEWRLKRRDTEEWMSHRQLPQNLRERVRRFVQYKWLATRGVDEETILRGLPTDLRRDIQRHLCLDLVRRVPFFSQMDDQLLDAICERLVSSLSTQGTNIVREGDPVTEMLFIIRGRLESSTTNGGRTGFFNSITLRPGDFCGEELLAWALLPKSTLNLPSSTRTVKALVEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRFKKRMLTKSLSLRECQSFNHDEQVGDEMEHGEEEHSAVTSNTAQVKQNLGVTILASRFAANTRRGVQKIKDVELPKFQKPEEPDFSVEPDDG 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00687 723 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 41 719 - -
Gma06g00687 723 Gene3D Helix hairpin bin 410 473 - -
Gma06g00687 723 Pfam Cyclic nucleotide-binding domain 505 593 IPR000595 -
Gma06g00687 723 Gene3D - 89 408 - -
Gma06g00687 723 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 14-RELATED 41 719 - -
Gma06g00687 723 Gene3D Jelly Rolls 480 600 IPR014710 -
Gma06g00687 723 MobiDBLite consensus disorder prediction 700 716 - -
Gma06g00687 723 Pfam Ion transport protein 84 409 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gma06g00687 723 ProSiteProfiles cAMP/cGMP binding motif profile. 482 565 IPR000595 -
Gma06g00687 723 SUPERFAMILY Voltage-gated potassium channels 78 404 - -
Gma06g00687 723 CDD CAP_ED 482 613 IPR000595 -
Gma06g00687 723 SUPERFAMILY cAMP-binding domain-like 412 604 IPR018490 -
Gma06g00687 723 MobiDBLite consensus disorder prediction 700 723 - -
Gma06g00687 723 SMART cnmp_10 482 613 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00687 Gma-Chr6 6264082 6268002 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00687 7 719 Ion Channels AT2G24610 70.539 0.0 1050
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00687 K05391 - gmx:100803334 1457.97