Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00685 ATGACAGTGGAGCTTATGGGGTTCCCCAAAATGGAGGAACAGAAGGCAATTCAAGAAGCTGCCTCCGAAGGCCTCAAGGCCATGGAACACCTCCTCCGTCTCCTATCCTATCAACCCTCTCACCTCCACGCTCACCACACCGACGCCACCGTTTCCAACTTCAAAAAACTCATCTCCTTACTCAGCCGCCGCACCGGCCACGCCCGTTTCCGTCGCGCACCTCTCCCTTCCCCGCCACCGGCTAACCCGGTCACCCTCCACCAACCTCCCTCCACCTTCGTCCCTTCGCACTCCCAGTCTCTAACCCTCGATTTCACAAAACCTAGCATTTTCGCCTCCAACGCCAAATCCATGGACCTCCAATTCTCTAAAGAAACCTTCAGCGTCTCCTCCAACTCCTCCTTCATGTCCTCCGCCATCACCGGCGACGCCAGTGTCTCTTACGGCAAACTAGGATCCTCCCTCTTCCTCACTCCTCCGCCAGTCTCAGCCGGAAAACCTCCTCTCTCCTCCGCTCCGATCAAGAAGAGGTGTCACGACCACCGCGAACACTCCGACGAGATCTCCGGGAAACTCTCCGGCTCCAGCAAGTGCCACTGCACTAAGAGAAGGAAGAATCGAGTGAAGAAAACGGTAAGAGTTCCGGTGATCAGTTCGAAGATCGCCGATATTCCGCCGGACGAGTACTCGTGGAGGAAGTACGGGCAGAAGCCGATCAAGGGATCGCCGTACCCGAGGGGGTATTACAAGTGCAGTAGCGTTAGAGGGTGTCCGGCGAGGAAACACGTGGAGCGTGCTCCGGACGATCCGACGATGTTGATTGTGACATATGAAGGGGAGCACCGGCACTCGATGCAGGAGAACATTTCCGGGGGAGTGGGTTTGGGATTCGAGTCAACGAGGGAAAATGTTTTAAGAAAGCCCAATGGCCTTCCCTACGTTTACGCAATCCCTTTAGTTTTGCGGGAAATTCTGAGCTTTGAAAAATGGTGGGTTGAAGAGGTAGAGAAGATCAGCAATAGCACTTTGTCTTGTCTGTGCCCTGAAGCCAGCCATCCAAACCCCGCTGCGATTGTCCTCGTTCTCGTTCTCGTCCTCTCTCAGCCGCGGAATCCGTCCCCCCGGAATCTGCCATGGAAGATGTATAGAATATTATCGACGCCGGCGTCGAAGTTCCGCCAGTTCCGGCGACTCCGGTCTCGACCGAAGGCAGCGACAGCGACAGCGACAGAGGAGGAGCACGCGTTCCAGATCCTATGGCGTTACCAGATCCTGGACCCCGACAGCGACATCGTGGCCTATTGGAACCGGGTGTTCCTTGTTACGAGCCTCCTCGCCCTCTTCATCGACCCTCTCTACTTCTTCCTCCCCACCGTTGGCGGCCCCGCCTGCCTCCAGGCTGATCCCAAACTCAGCATCCTCGTTACCATCCTCCGCTCCTTCGCCGACCTCTTCTACGTCCTCCACATGATCATGAAGTTTCGCACCGCCTTCGTCGCCCCCAACTCTCGAATCTTCGGCCGCGGCGAGCTCGTCATGGACGCCCGCGAAATCGCCATGCGCTACTTGAAGTCTGATTTCGTCATTGACCTTGCTGCCACCATCCCTCTCCCCCAGATTGTTATTTGGTTGGTGATTCCTGCCAGTAGAAACGCAAGAACTGACCATGCCAACAACACTCTTGCACTTTTTGTTCTTATTCAGTATGTTCCTAGGTTGTTTCTTATCTTTCCTTTGAACCAGCGTATTCAGAAAACCACTGGAGTTATCGCCAAGACTCCCTGGATTGGAGCCGCATACAATCTTGTTCTCTACATGCTAGCTAGTCATGTTACAGGAGCGACTTGGTATCTATCATCAATAGGGAGGCAATTTAGCTGCTGGAAAACGCAGTGCCAACTGGAGAACAAATCCCATACCCTCTCTTGCTTTTCTAGTTATCTTGATTGCAATAGTTTGAACCTCCCTGATAGACAATACTGGCTAAACATCACCCATGTAATCAGCAGATGTGACGCAAAGAGCAAGATCAACATCAAATATAAGTTTGGTATGTTCGCAGATGCTTTCCTCAATGATGTTGTCACTTCCAGTTTCAAGGAAAGATACTTCTATTGTCTTTGGTGGGGTTTGAGAAATTTAAGCTCATATGGACAGAATTTGGACACCACCACATATCTTCCAGAGACACTCTTCTGCATCGTCTTATGCATTGCTGGATTGGTTCTCTTTTCACTTTTGATTGGAAACATGCAGACGTACTTGTCATCAATGTCAGTTAGACTTGAAGAATGGAGGATTCGGAAAAGAGATACTGAAGAGTGGATGAGGCATCGCCAGTTACCACAGGATTTGCAGGAACGTGTCCGTCGTTTTGCTCAATACAAATGGCTTGCAACAAGAGGAGTCAATGAAGAAGCCATACTTCTTTCACTACCTTTGGATCTTCGTCGAGAAATTCAACATCACTTGTGTCTTTCTCTTGTGCGCCGTGTACCCTTCTTCTCACAAATGGATGATCAACTTCTTGATGCTATATGTGAACGGCTTGCGTCATCACTGAGCACCGAAGGAACCTACCTATTTCGAGAGGGTGATCCAGTGGATGAAATGTTGTTTATCATTAGAGGTCAATTGGAGAGCTCCACAACCAACGGAGGAAGGTCTGGATTCTTCAATTCCATCTCACTCCGGCCTGGTGACTTTTGTGGGGAGGAATTGTTGACATGGGCCTTAATGCCAAACTCAAACCTCAACCTACCTTCTTCTACACGCACAGTCAAAGCACTTACTGAAGTTGAAGCTTTTGCACTACAGGCAGAGGATCTGAAATCTGTGGCAAGTCAGTTCAAGCGTCTTCACAGCAAGAAACTTCAGCATGCATTTAGGTACTATTCCCATCAATGGAGGACATGGGCTTCTTGCTTCATACAAGCTGCTTGGAGACGGCATCAGAAGAGAAAAGCAACAAGGGAGTTATCCCTCAAAGAGGGTCTCTACTACCTGGCATTGTCTGAGGCTGAGAGGGATGGAAGTGGAAATTATGAGATCGAGGAATCCTCAGGGAGTGTGAAAAAGGTTCAGAATCTAGGTCCAACTGTTTTTGCCTCAAAGTTTGCTGCCAATACAAAGAAAGGAAACCATAAGCTACAAGATCCTGTGCCCCAATTGTTCAAGCCAGATGAACCTGATTTTTCTCTAGACCACGAACAAGTTTAG 3219 0.5008 MTVELMGFPKMEEQKAIQEAASEGLKAMEHLLRLLSYQPSHLHAHHTDATVSNFKKLISLLSRRTGHARFRRAPLPSPPPANPVTLHQPPSTFVPSHSQSLTLDFTKPSIFASNAKSMDLQFSKETFSVSSNSSFMSSAITGDASVSYGKLGSSLFLTPPPVSAGKPPLSSAPIKKRCHDHREHSDEISGKLSGSSKCHCTKRRKNRVKKTVRVPVISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSSVRGCPARKHVERAPDDPTMLIVTYEGEHRHSMQENISGGVGLGFESTRENVLRKPNGLPYVYAIPLVLREILSFEKWWVEEVEKISNSTLSCLCPEASHPNPAAIVLVLVLVLSQPRNPSPRNLPWKMYRILSTPASKFRQFRRLRSRPKAATATATEEEHAFQILWRYQILDPDSDIVAYWNRVFLVTSLLALFIDPLYFFLPTVGGPACLQADPKLSILVTILRSFADLFYVLHMIMKFRTAFVAPNSRIFGRGELVMDAREIAMRYLKSDFVIDLAATIPLPQIVIWLVIPASRNARTDHANNTLALFVLIQYVPRLFLIFPLNQRIQKTTGVIAKTPWIGAAYNLVLYMLASHVTGATWYLSSIGRQFSCWKTQCQLENKSHTLSCFSSYLDCNSLNLPDRQYWLNITHVISRCDAKSKINIKYKFGMFADAFLNDVVTSSFKERYFYCLWWGLRNLSSYGQNLDTTTYLPETLFCIVLCIAGLVLFSLLIGNMQTYLSSMSVRLEEWRIRKRDTEEWMRHRQLPQDLQERVRRFAQYKWLATRGVNEEAILLSLPLDLRREIQHHLCLSLVRRVPFFSQMDDQLLDAICERLASSLSTEGTYLFREGDPVDEMLFIIRGQLESSTTNGGRSGFFNSISLRPGDFCGEELLTWALMPNSNLNLPSSTRTVKALTEVEAFALQAEDLKSVASQFKRLHSKKLQHAFRYYSHQWRTWASCFIQAAWRRHQKRKATRELSLKEGLYYLALSEAERDGSGNYEIEESSGSVKKVQNLGPTVFASKFAANTKKGNHKLQDPVPQLFKPDEPDFSLDHEQV 1072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00685 1072 MobiDBLite consensus disorder prediction 72 93 - -
Gma06g00685 1072 Gene3D Jelly Rolls 832 952 IPR014710 -
Gma06g00685 1072 SUPERFAMILY Voltage-gated potassium channels 426 756 - -
Gma06g00685 1072 ProSiteProfiles WRKY domain profile. 220 286 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma06g00685 1072 CDD CAP_ED 834 965 IPR000595 -
Gma06g00685 1072 Pfam Plant zinc cluster domain 175 223 IPR018872 -
Gma06g00685 1072 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 18 412 1067 - -
Gma06g00685 1072 SMART cnmp_10 834 965 IPR000595 -
Gma06g00685 1072 Pfam WRKY DNA -binding domain 227 283 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma06g00685 1072 Gene3D WRKY domain 210 285 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma06g00685 1072 Pfam Cyclic nucleotide-binding domain 857 949 IPR000595 -
Gma06g00685 1072 SUPERFAMILY cAMP-binding domain-like 764 959 IPR018490 -
Gma06g00685 1072 MobiDBLite consensus disorder prediction 1045 1072 - -
Gma06g00685 1072 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 412 1067 - -
Gma06g00685 1072 SUPERFAMILY WRKY DNA-binding domain 223 285 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma06g00685 1072 Gene3D Helix hairpin bin 758 825 - -
Gma06g00685 1072 Gene3D - 441 757 - -
Gma06g00685 1072 Pfam Ion transport protein 434 761 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gma06g00685 1072 SMART WRKY_cls 225 285 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma06g00685 1072 ProSiteProfiles cAMP/cGMP binding motif profile. 834 964 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00685 Gma-Chr6 6233062 6242747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00685 390 1072 Ion Channels AT5G14870 66.147 0.0 984
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma06g00685 Ion_trans 1.1e-26 CL0030
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00685 K05391 - gmx:100802812 1394.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00694 04 6471614 6473815 Gma06g00685 06 6233062 6242747 GST