Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00678 ATGGACTTCTCTAGTTTTGATGATGATCAAGGTATGGAGATGGATGATGACATGGAAGTTGAGGATGGGGAAGCAGATGAGGTGCAATCTGAATTCAAGGACAAGATTTTGGGTGTTTTGAAAGAGGGAGATTTTGCAGAGAAGAGGTCGTCCAAGCTCACATTGCAGGAATTCCTATACTGTTTAACAAAGCTGGCATACACTTCTCCTTATTTTAGATGGCTTGGAATAATCTTTTGGAGAACAAGACTACCTTCACTACAAAGAGACTATGGCAaagaagggagagaagcacagtgggcaactgcacagaggactcttcatggtcttcagccacctgaaacagccaaccttttcaattacaagaacagttacagggagctttcagagattgctgagcaagctaagagacatgCTGAGGATGCTAGGGAGCTTCATACTTTGAAAGGACATGTTGAATCAGTGAAGCTGAAGACATTGATACAATCCAACAGCATTATAAAGTTTAAGGAGTTTGGACAACCTTCAAGCAGAACACACTTTGGTGCTTGTCCAAGAACTAGAACAACAAATATAATGAAGGCCCAAGTTAATCCGCCTTTAGATTAA 609 0.3087 MDFSSFDDDQGMEMDDDMEVEDGEADEVQSEFKDKILGVLKEGDFAEKRSSKLTLQEFLYCLTKLAYTSPYFRWLGIIFWRTRLPSLQRDYGKEGREAQWATAQRTLHGLQPPETANLFNYKNSYRELSEIAEQAKRHAEDARELHTLKGHVESVKLKTLIQSNSIIKFKEFGQPSSRTHFGACPRTRTTNIMKAQVNPPLD 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00678 202 PANTHER CALCIUM-TRANSPORTING ATPASE 88 155 - -
Gma06g00678 202 MobiDBLite consensus disorder prediction 1 25 - -
Gma06g00678 202 Gene3D - 123 171 - -
Gma06g00678 202 PANTHER PLASMA MEMBRANE ATPASE 88 155 - -
Gma06g00678 202 Gene3D - 5 73 - -
Gma06g00678 202 Coils Coil 125 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00678 Gma-Chr6 6160704 6162415 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00678 86 160 Primary Pumps ATPases AT4G30190 75.641 2.29e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00678 K01535 - gmx:102665489 126.331