Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00658 ATGCACGCGAAATCGGCGCAGTCGTCGTTCCGGGATCGGACTCAGGAATTCCACAGCATCACAGAGAGGTTGAAGAAGTCCGGATCAGGGCCCAATGGGCCCAGCAGCAGCACTTCTTCCACCAGATCGGAGGAACAGCGATCCGCGATCGCCAACCAATCGGAGTTCAATAGAAGGGCCTCCAAAATCGGATACGGAATTCACCAAACGTCTCAGAAACTCGCCAAACTCGCCAAGTTGGCGAAGAGGACGTCGGTTTTTGATGACCCTACTATGGAAATCCAAGAGCTTACGGGGGTTATTAAGCAGGATATTACTGCTCTGAACTCTGCCGTTGTGGATCTTCAGTTTCTGTGTAACTCTAGGAATGAGAGTGGGAATGTTTCCGCCGACACCACTAGCCATTCGAGCACTGTGGTCGATGACTTGAAAACACGGTTGATGAGCACCACCAAAGAGTTTAAGGATGTTCTCACCATGAGAACTGAGAACATGAAAGTGCATGAGAATAGAAGACAGTTGTTTTCATCTTCTGCATCTAAGGATTCTGCAAATCCTTTTATTCGGCAACGGCCGTTGGCTGCAAGGGCGGCTGCTAGTACTTCTAATGCCCCTGCTCTTCCCTGGGCTAATGGGTCACCATCTTCATCTCAGGCGTTTCCTAAGAAGCAAGTGGATGGGGAGAGTCAACCATTGTTGCAACAACAGCAGCAGCAGCAGGAGGTAGTTCCATTGCAAGACAGTTACATGCAAAGCAGAGCTGAAGCTCTTCAGAATGTTGAGTCCACTATTCACGAGCTTAGCAACATTTTTAATCAGCTTGCAACACTTGTTTCCCAACAAGGAGAGATTGCCATCAGGATTGATGAAAACATGGACGATACATTGGCAAACGTAGAGGGAGCACAAGGGGCTTTGCTGAAGTATCTGAACAGCATATCTTCTAATCGGTGGTTGATGATCAAAATTTTCTCTGTGTTAATATTTTTCCTTATGGTTTTCTTATTTTTTGTGGCATAG 1020 0.4706 MHAKSAQSSFRDRTQEFHSITERLKKSGSGPNGPSSSTSSTRSEEQRSAIANQSEFNRRASKIGYGIHQTSQKLAKLAKLAKRTSVFDDPTMEIQELTGVIKQDITALNSAVVDLQFLCNSRNESGNVSADTTSHSSTVVDDLKTRLMSTTKEFKDVLTMRTENMKVHENRRQLFSSSASKDSANPFIRQRPLAARAAASTSNAPALPWANGSPSSSQAFPKKQVDGESQPLLQQQQQQQEVVPLQDSYMQSRAEALQNVESTIHELSNIFNQLATLVSQQGEIAIRIDENMDDTLANVEGAQGALLKYLNSISSNRWLMIKIFSVLIFFLMVFLFFVA 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00658 339 SMART tSNARE_6 242 309 IPR000727 -
Gma06g00658 339 Pfam SNARE domain 283 335 IPR000727 -
Gma06g00658 339 MobiDBLite consensus disorder prediction 205 238 - -
Gma06g00658 339 ProSitePatterns Syntaxin / epimorphin family signature. 253 292 IPR006012 GO:0005484|GO:0006886|GO:0016020
Gma06g00658 339 Gene3D - 50 302 - -
Gma06g00658 339 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 7 26 IPR021538 -
Gma06g00658 339 PANTHER SYNTAXIN 2 338 IPR045242 -
Gma06g00658 339 SUPERFAMILY t-snare proteins 53 302 IPR010989 GO:0016020|GO:0016192
Gma06g00658 339 MobiDBLite consensus disorder prediction 1 23 - -
Gma06g00658 339 MobiDBLite consensus disorder prediction 1 55 - -
Gma06g00658 339 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 247 309 IPR000727 -
Gma06g00658 339 MobiDBLite consensus disorder prediction 25 55 - -
Gma06g00658 339 PANTHER SYNTAXIN-32-LIKE 2 338 - -
Gma06g00658 339 CDD SNARE_syntaxin5 250 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00658 Gma-Chr6 5956566 5959157 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00658 1 339 SNARE and Associated Proteins AT3G24350 65.840 2.57e-149 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00658 K08490 - gmx:100811494 545.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00665 04 6168007 6172602 Gma06g00658 06 5956566 5959157 GST