Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00652 ATGGGTTTGGATTACTATAATGTGTTGAATGTTAACAGAAATGCTACAGAGGATGATCTAAAAAAAGCGTATAGAAAGTTGGCCATGAAATGGCACCCTGACAAGAACCCCACAAACAAAAAAGAAGCTGAAGCCAATTtCAAAGAGATCTCTGAGGCATACGAGGCAAGAAACGTACTGAGCGATCCACAGAAGAGGGTGGTTTATGATCAGGATGGAGAGGAAGGGCTGAAAGATAGGCCACCACCAGGTAATGAATCAGCATCAAGTGGGTTTAATCCCAGAAATGCAGAGGATATTTTTGCAGAATTCTTTGGAAGTAGCCCTTTTGGATTTGGGTCATCTGGGCCAGGAAGGTCCAAGAGGTTCCCATCTGATGGAGGTGGATTCAGTGCAACTGACAATAATTTCCGAACCTATAGTACAGGACGGGCGAATATGCCAAAGAAGCCACTACCTGTGGAGACCAAACTAGCTTGTAGTTTGGCGGAGTTATACTCTGGATCTACCAGGAAAATGAAGATCTCAAGGAGTGTCGTGGATGTTAACGGACAGGCAATACCAGAGACCGAGATACTAACCATTGAGGTGAAGCCGGGTTGGAAGAAAGGGACAAAGATTACATTCCCAGACAAAGGGAATCAGCAACCAAATCAACTGGCAGCAGACCTTGTGTTCGTGATTGATGAGAAGCCTCATGATTTGTTCGATAGAGATGGCAATGACCTCATTGTGAGCAAAAGGGTGTCACTGGCAGAGGCCATTGGAGGAACCACAATAAATCTCACCACACTCGATGGACGCAGTTTGAGTATTCCTGTGAGTGACATAGTGAGCCCTGGTTATGAGATGATTGTTGCAAATGAAGGGATGCCAATAACAAAGGAGCCTGGTCATAGGGGTGATTTGAGGATCAAATTTGATGTGAAGTTTCCAACAAGGTTGACACATGAGCAACGAGCAGGACTCAAACGAGCATTGGGAAGTTGA 990 0.4495 MGLDYYNVLNVNRNATEDDLKKAYRKLAMKWHPDKNPTNKKEAEANFKEISEAYEARNVLSDPQKRVVYDQDGEEGLKDRPPPGNESASSGFNPRNAEDIFAEFFGSSPFGFGSSGPGRSKRFPSDGGGFSATDNNFRTYSTGRANMPKKPLPVETKLACSLAELYSGSTRKMKISRSVVDVNGQAIPETEILTIEVKPGWKKGTKITFPDKGNQQPNQLAADLVFVIDEKPHDLFDRDGNDLIVSKRVSLAEAIGGTTINLTTLDGRSLSIPVSDIVSPGYEMIVANEGMPITKEPGHRGDLRIKFDVKFPTRLTHEQRAGLKRALGS 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00652 329 MobiDBLite consensus disorder prediction 129 143 - -
Gma06g00652 329 SMART dnaj_3 3 65 IPR001623 -
Gma06g00652 329 SUPERFAMILY HSP40/DnaJ peptide-binding domain 149 244 IPR008971 GO:0006457|GO:0051082
Gma06g00652 329 CDD DnaJ_C 154 315 - -
Gma06g00652 329 PRINTS DnaJ domain signature 6 24 IPR001623 -
Gma06g00652 329 PRINTS DnaJ domain signature 24 39 IPR001623 -
Gma06g00652 329 PRINTS DnaJ domain signature 42 62 IPR001623 -
Gma06g00652 329 PRINTS DnaJ domain signature 65 84 IPR001623 -
Gma06g00652 329 MobiDBLite consensus disorder prediction 115 148 - -
Gma06g00652 329 Gene3D - 232 328 - -
Gma06g00652 329 Gene3D DnaJ domain 3 115 IPR036869 -
Gma06g00652 329 CDD DnaJ 4 62 IPR001623 -
Gma06g00652 329 Pfam DnaJ C terminal domain 154 312 IPR002939 -
Gma06g00652 329 Pfam DnaJ domain 4 70 IPR001623 -
Gma06g00652 329 SUPERFAMILY HSP40/DnaJ peptide-binding domain 236 321 IPR008971 GO:0006457|GO:0051082
Gma06g00652 329 SUPERFAMILY Chaperone J-domain 4 114 IPR036869 -
Gma06g00652 329 ProSiteProfiles dnaJ domain profile. 4 73 IPR001623 -
Gma06g00652 329 PANTHER DNAJ HEAT SHOCK FAMILY PROTEIN 1 328 - -
Gma06g00652 329 MobiDBLite consensus disorder prediction 71 93 - -
Gma06g00652 329 Gene3D - 153 231 - -
Gma06g00652 329 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00652 Gma-Chr6 5905435 5907542 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00652 5 70 C2H2 Transcription Factor Family AT1G74250 40.000 8.33e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00652 K09510 - gmx:100796426 628.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00659 04 6098200 6100023 Gma06g00652 06 5905435 5907542 GST