Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00646 ATGGCTGTGCTGCTGAGAATGGCTCAGCCTCACAATGGCAACACCAACAACACTTCAAACCAGCAATTGGTACTCCATGACTTTCTGGGTATGAGGCCCGCCGCCGATTCCCCCAAAACCGCCGATGTCAGGTTACCGGAGCCTTCGGCCTCCGCCTCTTCCACCGGAGGACGCGGCCCCTTCTCCGCCACCTCCGACATCGCTTCCGAAAAACAGGTAGGAAATCATCTCGAGGGAGTTCCATTCTATGGCCCGAGGAGTGATTTTTCTGGCACTGAGATAAGCAACAGATTAGTGGGAAGCAAGAGAAGTAATTCTGATTCCACTTTTATGGGTTCCTCCAGAGATGCCTTCCAATTGGTCCCTGATTCCTTTCAAAACTCACATTTGATGAAGGTTCTCCGGAATGCAGCTGGAGGAGAAAGGCCTAGAAGGCCCAATGATGATGCAGTGTTACTTGGTATGCAGTCAATGAAGCCATCTTCTTCTCAGATATTTCAGCCTCCCACCAGCACTAAGATTGATGCCAATAAATGGGAACGGTCTATTCTCATGAATGTTGGCCCTTCCATGCAGCATCCACCGCGTGGGGTGCAATTGGCACCTTTTGTGCACCAAATGGCTTCAAGCAAGATTAGGGATACCAATGCTGGCCCTTCATTCATTTCTCAGTCAGCTGCTGATGAAGGTTCTAGAACTGGAATCAAGGGCCCTGGAATTTTAAGTTCTGCAGCTGCTACAGCCACTGAGAAAAGTATTCCATCTGCTGTGATGCTTGGTGGCAGCAGGCCAAAGCCTGGAACTAATGTAGTAGAATCATCCACACATCCAAGCAGTCAACATGGGCTAACTTCTGCCAGCCGCCAGATGACTATTTTTTATGGAGGCCAAGCTCATGTTTTTGATGATGTCCACCCTCATAAGGCAGATGTTATAATGGCTTTGGCTGGGTCAAATGGAGGATCTTGGTCCACTGCATTCTCGCCTAAATCTGCTGTAAAGATGGTTAATGATGGTATCTTGCATAGCGGAGAAAATGAAACAGGTGTAGTTAGTAATGCAGCATTCCCACAGGAGCTTCATGGGAAATTGTCTATTACTGGCAGTTCTAGCCATGCCATTGGGCTTGGTGATCGAGTAACTACTCCAGCGGGGAAACACCATGGAAACGTTTTTGCGAAAGATACAAGAAATCCGGTCCAACCACCAGATCCCAGTTCTGAAGACAAAAGAGCACAGTGA 1242 0.4831 MAVLLRMAQPHNGNTNNTSNQQLVLHDFLGMRPAADSPKTADVRLPEPSASASSTGGRGPFSATSDIASEKQVGNHLEGVPFYGPRSDFSGTEISNRLVGSKRSNSDSTFMGSSRDAFQLVPDSFQNSHLMKVLRNAAGGERPRRPNDDAVLLGMQSMKPSSSQIFQPPTSTKIDANKWERSILMNVGPSMQHPPRGVQLAPFVHQMASSKIRDTNAGPSFISQSAADEGSRTGIKGPGILSSAAATATEKSIPSAVMLGGSRPKPGTNVVESSTHPSSQHGLTSASRQMTIFYGGQAHVFDDVHPHKADVIMALAGSNGGSWSTAFSPKSAVKMVNDGILHSGENETGVVSNAAFPQELHGKLSITGSSSHAIGLGDRVTTPAGKHHGNVFAKDTRNPVQPPDPSSEDKRAQ 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00646 413 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 52 412 IPR040390 -
Gma06g00646 413 PANTHER PROTEIN TIFY 8 52 412 - -
Gma06g00646 413 SMART tify_2 283 318 IPR010399 -
Gma06g00646 413 MobiDBLite consensus disorder prediction 35 64 - -
Gma06g00646 413 MobiDBLite consensus disorder prediction 267 284 - -
Gma06g00646 413 MobiDBLite consensus disorder prediction 377 413 - -
Gma06g00646 413 Pfam tify domain 285 317 IPR010399 -
Gma06g00646 413 ProSiteProfiles Tify domain profile. 283 318 IPR010399 -
Gma06g00646 413 MobiDBLite consensus disorder prediction 47 64 - -
Gma06g00646 413 MobiDBLite consensus disorder prediction 256 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00646 Gma-Chr6 5853031 5860028 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00646 18 316 Tify Gene Family AT4G32570 41.534 6.03e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Gma06g00646 tify 2.6e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00646 - - gmx:100807222 825.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00653 04 6030501 6037290 Gma06g00646 06 5853031 5860028 GST
Gma17g01945 17 34532316 34537869 Gma06g00646 06 5853031 5860028 PCT
Gma06g00646 06 5853031 5860028 Gma17g01945 17 34532316 34537869 PCT