Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00630 ATGTCCACGCGTGCCAAGAACGTGTTTGCAAGGTTCTGTTTTTGCCATGATGAGGCTGCGGATGATGAGAGGCATAGAAAGCACGTAGAGTTTGATCAAATGACGAATGAAGGAAGCCAATACAGCCTCAACGGAGTTCCGCTTCCGTCTCTCGGCGCCACCGCCGCTGGCCGCTCCCAGAGATACAAGCTCCGGAGTTACATTGTCTCCCCGTACAATCCTCGTTACAGATTGTGGAACACGTTTCTGGTGTTGTTAGTTTTCTACACTGCATGGGTTTGCCCCTTTGAGTTTGGATTCCTTAACGATCCGTCGGATCCTCTTTCCATTGCTGACAATGTGGTGAACTTTTTTTTTGCCATTGACATTGTTCTGACCTTCTTTGTTGCCTACCTCAACAAGTCTACGTATCTGCTCGTGGATGAACCAAAGCTCATTGCCTCCAGATATCTTAGAACATGGTTTGCCTTTGATGTCCTCGCCACCGTCCCTTCTGAATTTGCCCGCCACGTCTTGCCGCCTCCTTTTAAGCAATATGGCATGTTCAACATTCTCCGTCTATGGCGTCTCCGTAGAGTTAGTGCCATGTTTGCAAGATTAGAAAAGGACAGAAATTATAACTACTTCTGGGTGCGCTGTTCAAAGCTTATATGTGTTACGCTATTTTCAGTGCATTTTGCTGCCTGCATTTTCTATTTTCTTGCTTTAGATCGTGACCCAAGTTCAACATGGCTTAGCCTGGTTTCTGATGACGCTCAAAGCAGTGTTTGGAAGCGCTATGTAACATCAATGTACTGGTCCATAGTGACTCTTTCAACAGTCGGTTATGGTGACCTGCATCCAGTAAGTACCAAGGAGATGGTGTTTGACGTATTTTATATGCTCTTTAACCTCGGACTAACGGCATATCTTATCGGAAACATGACAAACTTGGTTGTTCATGGGACAAGCAGAACTAGGAAATATAGAGACACGGTGCAAGGTGCGACAAGTTTTGCCCGTCGGAATCAGTTACCTATCCGCTTGGAAGAACAGATGCTTGCTCATTTGTTTATGAAGTACAGAACTGATTTAGAAGGATTGCAGCAACAAGAAATTATTGAAACCCTTCCAAAGGCTATTAGATCTAGCATCGCACACTACCTATTCTATCCACTTGTGGACAAAGTGTACTTGTTTCATGGAGTGTCGAGTGACCTACTCTTTCAACTGGTCACGGAGATGAGGGCTGAGTATTTTCCTCCAAAGGAAGATGTGATTTTGCAGAATGAAGCGCCAACAGACTTTTATATCTTTGTTACTGGTGCTGCAGAACTCATCATTAGAAACAATGGAATGGAGCAGGTCGTTGGTGAGGCAGGGTCAGGAGATATAGTTGGAGAAATAGGAGTTCTATGTTACAGGCCACAGATGTTTACAATTCGAACCAAACGATTGAGCCAAATTCTGCGCTTGAACCGTACTACATTTATAAATCTTGTTCATTCAAATATTGGAGATGGGGCAATAGTTATGAACAATTTTCTCCAGCATTTGCAAGAATCAAGGTATCCGGGGATGGATGTTATTTTGGCAGAAACGGAGGCCATGCTTGCTCGGGGCAAAATGGACATGCCCATTACCACATGCTTTGCAGTAACCAGAAATGATGATCTATTGTTGCATCGTTTGCTTAAGAGGGGTTCAGATCCAAATGAATTAGATAGGAGTGGAAAGACAGCACTGCATATTGCAGCTTCCAAAGGCAATGAGCATTGTGTAAATTTGCTTCTAGAATATGGTGCTGATCCAAATAGCAAAGATATGGATGGAAGTGTCCCACTATGGGAAGCAATGAAGGGTAGGCATGAATCCGTGATGAAAATTCTCATAGACAATGGTGCAGACATATCTTTTGCCGATGCAGGCCATCTAGCATGCAGTGCTGTTGAGCAAAATAACATGGAATTGCTCAAGGAAATTATTCAATGTGGCATGGATGTGACACAACCTAAAAAAAATGGAGCCACAGCTCTTCATACTGCAGTAGTTGAAGGAAACACTGAGATGATTAACTTCCTTGTAGACCAAGGAGCAGACATTGACATGCAAGATGTTAATGGGTGGACACCAAGGGTTTTGGCAGAACAAAGTGAAAGCGAAGAAATTAAAAATATATTCCATGACATTAAAGATAGCAGAAAACCAGGTGTTATTCCAATTTCAAAGAATGACAACAGGAGTGGGAGGTTTCAAATTGATCCAAGCATGCTTACCATACCCCAAGAAAGCATGCTACTGCCACCTTATGATGGGAGGAGAAGGTCTTCCAGCTCTTTTGATAATTCCATTTTTGGAATGATGTCAACTGCCAATCGTGCTAAGAGAGATCTCCAGGCATCTGAAAGCAGTAGCACTAGAAGGAGTGTGAATGGATTAGCCAGAGTGACACTTAGTTGTCCTGAAAAGGGTGAACATGCTGGAAAGCTTGTTTTGCTGCCCAAGACCCTTGAAGAGCTGCTAGATATTGGTGCCAGAAAGTTTGATATATCTGCCACCAAAATTTTGACCACAAATGGAGCTGAAGTAGAGGATATAAATCTTGTAAGAGATGGTGATCATCTTATTATTGGCGGTATTGAAGAGGGAAACAAGAATTGA 2640 0.4307 MSTRAKNVFARFCFCHDEAADDERHRKHVEFDQMTNEGSQYSLNGVPLPSLGATAAGRSQRYKLRSYIVSPYNPRYRLWNTFLVLLVFYTAWVCPFEFGFLNDPSDPLSIADNVVNFFFAIDIVLTFFVAYLNKSTYLLVDEPKLIASRYLRTWFAFDVLATVPSEFARHVLPPPFKQYGMFNILRLWRLRRVSAMFARLEKDRNYNYFWVRCSKLICVTLFSVHFAACIFYFLALDRDPSSTWLSLVSDDAQSSVWKRYVTSMYWSIVTLSTVGYGDLHPVSTKEMVFDVFYMLFNLGLTAYLIGNMTNLVVHGTSRTRKYRDTVQGATSFARRNQLPIRLEEQMLAHLFMKYRTDLEGLQQQEIIETLPKAIRSSIAHYLFYPLVDKVYLFHGVSSDLLFQLVTEMRAEYFPPKEDVILQNEAPTDFYIFVTGAAELIIRNNGMEQVVGEAGSGDIVGEIGVLCYRPQMFTIRTKRLSQILRLNRTTFINLVHSNIGDGAIVMNNFLQHLQESRYPGMDVILAETEAMLARGKMDMPITTCFAVTRNDDLLLHRLLKRGSDPNELDRSGKTALHIAASKGNEHCVNLLLEYGADPNSKDMDGSVPLWEAMKGRHESVMKILIDNGADISFADAGHLACSAVEQNNMELLKEIIQCGMDVTQPKKNGATALHTAVVEGNTEMINFLVDQGADIDMQDVNGWTPRVLAEQSESEEIKNIFHDIKDSRKPGVIPISKNDNRSGRFQIDPSMLTIPQESMLLPPYDGRRRSSSSFDNSIFGMMSTANRAKRDLQASESSSTRRSVNGLARVTLSCPEKGEHAGKLVLLPKTLEELLDIGARKFDISATKILTTNGAEVEDINLVRDGDHLIIGGIEEGNKN 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00630 879 Pfam Ankyrin repeats (3 copies) 638 715 IPR002110 GO:0005515
Gma06g00630 879 Pfam Ankyrin repeats (3 copies) 545 631 IPR002110 GO:0005515
Gma06g00630 879 Pfam KHA, dimerisation domain of potassium ion channel 808 870 IPR021789 -
Gma06g00630 879 PANTHER POTASSIUM CHANNEL AKT1 5 879 IPR045319 GO:0005249|GO:0006813
Gma06g00630 879 Gene3D - 77 313 - -
Gma06g00630 879 ProSiteProfiles Ankyrin repeat region circular profile. 570 601 - -
Gma06g00630 879 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 5 879 - -
Gma06g00630 879 ProSiteProfiles cAMP/cGMP binding motif profile. 392 511 IPR000595 -
Gma06g00630 879 SUPERFAMILY Ankyrin repeat 543 722 IPR036770 -
Gma06g00630 879 Gene3D Jelly Rolls 358 522 IPR014710 -
Gma06g00630 879 ProSiteProfiles Ankyrin repeat profile. 603 635 IPR002110 GO:0005515
Gma06g00630 879 ProSiteProfiles Ankyrin repeat region circular profile. 667 698 - -
Gma06g00630 879 ProSiteProfiles Ankyrin repeat profile. 667 699 IPR002110 GO:0005515
Gma06g00630 879 SMART ANK_2a 634 663 IPR002110 GO:0005515
Gma06g00630 879 SMART ANK_2a 570 599 IPR002110 GO:0005515
Gma06g00630 879 SMART ANK_2a 603 632 IPR002110 GO:0005515
Gma06g00630 879 SMART ANK_2a 667 696 IPR002110 GO:0005515
Gma06g00630 879 SMART cnmp_10 392 509 IPR000595 -
Gma06g00630 879 ProSiteProfiles Ankyrin repeat region circular profile. 603 634 - -
Gma06g00630 879 SUPERFAMILY cAMP-binding domain-like 317 512 IPR018490 -
Gma06g00630 879 ProSiteProfiles KHA domain profile. 808 879 IPR021789 -
Gma06g00630 879 Pfam Cyclic nucleotide-binding domain 412 496 IPR000595 -
Gma06g00630 879 CDD CAP_ED 392 497 IPR000595 -
Gma06g00630 879 PRINTS EAG/ELK/ERG potassium channel family signature 89 96 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gma06g00630 879 PRINTS EAG/ELK/ERG potassium channel family signature 112 122 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gma06g00630 879 PRINTS EAG/ELK/ERG potassium channel family signature 123 132 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gma06g00630 879 PRINTS EAG/ELK/ERG potassium channel family signature 260 277 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gma06g00630 879 PRINTS EAG/ELK/ERG potassium channel family signature 286 297 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gma06g00630 879 PRINTS EAG/ELK/ERG potassium channel family signature 304 313 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gma06g00630 879 SUPERFAMILY Voltage-gated potassium channels 71 313 - -
Gma06g00630 879 Pfam Ion transport protein 77 319 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gma06g00630 879 PRINTS Ankyrin repeat signature 571 586 IPR002110 GO:0005515
Gma06g00630 879 PRINTS Ankyrin repeat signature 619 633 IPR002110 GO:0005515
Gma06g00630 879 ProSiteProfiles Ankyrin repeat profile. 570 602 IPR002110 GO:0005515
Gma06g00630 879 Gene3D - 539 722 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00630 Gma-Chr6 5693687 5699308 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00630 32 870 Ion Channels AT2G25600 57.593 0.0 998
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00630 K21867 - gmx:100802964 1758.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00630 06 5693687 5699308 Gma06g00630 06 5693687 5699308 ECH
Gma04g00640 04 5872125 5878577 Gma06g00630 06 5693687 5699308 GST
Gma17g01973 17 35236166 35243744 Gma06g00630 06 5693687 5699308 PCT
Gma14g01118 14 16470619 16482347 Gma06g00630 06 5693687 5699308 PCT
Gma06g00630 06 5693687 5699308 Gma17g01973 17 35236166 35243744 PCT
Gma06g00630 06 5693687 5699308 Gma14g01118 14 16470619 16482347 PCT