Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00624 ATGACTAAGAAGAAGAATCCCCTGGTGTTTATGGATGTGTCGATCGATGGGGATCCTGTTGAAAGGATGGTTTTTGAGCTTTTCTATGATGTTGCTCCCAAGACTGCAGAAAACTTTCGTGCATTATGTACAGGAGAAAAAGGCATCAGTCCAAATACTGGAAAATCACTGCACTACAAGGGTTCTTTCTTCCATCAGATCATAAAAGGTTCCATTGTGCAGGTAGGTTGTTCTATTTTTACTTGGACTGCTGGAGAAAGCATATATGGTTCAAAGTTCCCAGATGAGTCACCTAGGCTAAAGCATGATGCTACTGGCCTTTTATCAATGGCAATTGCAGACCGTGACACACTCGGTTCCCATTTCATTATCACTTTGAAAGCTGATCATCATCTTGATAGGAAACATGTAGTCTTTGGGAAGCTTGTGCAAGGGCATAATGTATTGAAGAAAATTGAAGAATTCGGTGATGAAGAAGGGCATCCAACTGTAACTGTTAAAATCATTAATTGTGGTGAATATAGCGAGGatggaaagaaggtaaataaatcaaaaatggGAAAGAATAAAAAATCTTCAAAAGACAGAAGGAAAAGGAGAAAATACTACTCATCTGAATCCGGGAGCTCTTCAGATTCTGATACAGAATCTTTGGAAACTGATAGTGATTCCGAGTCAGATATGTCCTCATCATCTTACATGAGTTCTTCTAGTGATGACAGGCGAAAGAAGAGAAAGAGATCTAAGAAAGATAAATATAGACGGGGAAAGAGAAAAGATAAACGTCGTGACAAGAGGCGAAGGAAAAAGGATAAGAGATCAAAGCGTAAATCAAAAAGGGAATCGGGCAGTGACTCAGATAGTGAGAGTAACAGTGACAATAGCTCTGAAGGTGAAAATATTGGTGCTCAACATAAAGGGCTTAAGCGTAAAGATAATTCTCAGAAAAATGCTGAAACAAAGTCTCCCTTGGTTGCGGAGAAAGATTTGcctcctgcgcatcatgaaaaggaggaaatgggtatgctagagaatgaggaaaaATTGTCAAAGGAAAACGGAGAGCGACGTAACAATGGCATTGGAGGAGCTGACTATGGATCTGACAGAAGTGAAGAGAGGCAGCCTGACGTTATGGATGATCATTCAGGCAAAACTAGCAGGAGTCGAAGCGTGAGTCCTAAGCGACCCATGAGTAAGAGTATGAGTATTAGTCCCAGGAGGAGTGCGAGCAAGAGCCCAAGTGTTACTCCAAAAAGGAGATTGAGCAAAAGTCCCAGTGTTAGAAGCCCTCCTCCATCACAGAGGAGTTTGagcagaagtcctgccagaagcatcagcaggagtccgagcagaagcatcagtagaagcccagtaagaggcaggaatgggagaagtgtcaatagaagtccagtgagaggcaggaatgggagaagtgtcagtagaagcccagtgagaggcaggaatgggagaagtgtccgtagaagcccagtgagaggcaggaatgggagaagtgtccgtagaagcccagtgagaggcaggaatgggagaagtgtcagtagaagcccagtgagaggcaggaatgggagaaatgtcaatagaacccctgtgagaggcgggaatgggaaaagtgtcagtagaagccctgtgagaactcgttctcttaaaagtgtcagtagaagccctgtgagaactcgttctcttagaagtgtcagcaagagccctgtgagagctcgttctcAAAGCCACCGGAGCAGGAGTTCTCCTAGAGCACCATCAGGAAAAACTATCAGCAGAAGCCCTGTAAGAGTGTTGAGAAAGAGTATAAGCCGCAGTCCAGTTAGATCACCTGCAAGAAGTTTAAGCAGAAGCTCTGGCTGGGTTCCTTCAAAGAAAAGCATCAGCCGAAGCCCAGTCAGAGCACCTAGTAGAAGCATTCGCCGTAGTTATTCTAGAAGTCCTAGCCCTGTTCGTAGGACAAGGACACCTCGTGGGAGAAGTGTGTCAAGGAGCGTATCACCTGATGCTTCACCAAAGCGTATCAGAAGGGGAAGAGGTTTCAGTGAAAGATACTCTTATGCAAGAAGGTATAGAACCCCCTCCCGGTCTCCTGTGAGGTCATACCGCTACAATGGAAGAAATGACCGGGACAGATATTCTAGTTACAGAAGGTTTTCCCCTAGGCGTTTCAGGAGCCCACCACCGCGTGGAAGAACTCCTCCAAGGTATCGAAGCAGGAGGAGCAGGACACCATCTGTTTCACGCAGTCCACGATATCGAGCTCGACGATATAGCCGAagtaggagcccagttcgtagtaggagtccagttcgCAGTCGTTCCCCAGTTGATCGATCCCGCCCCACTCGTGTGGAGAGGCGTGCATCTTCTTCTCGGAGCAGGAGTCCATCCAAATCCCGGTCTAGGTCTAGGTCCAGGTCATCCGTGGAATCTCTACCAAGAGCAAGTAGAGACAGCAGGTCCAGGTCATCGTCCAGAAGCCCAGATGGAAAGAAAGGCTTGGTCTCATATGGCGATGGTTCTCCATACTAA 2553 0.3557 MTKKKNPLVFMDVSIDGDPVERMVFELFYDVAPKTAENFRALCTGEKGISPNTGKSLHYKGSFFHQIIKGSIVQVGCSIFTWTAGESIYGSKFPDESPRLKHDATGLLSMAIADRDTLGSHFIITLKADHHLDRKHVVFGKLVQGHNVLKKIEEFGDEEGHPTVTVKIINCGEYSEDGKKVNKSKMGKNKKSSKDRRKRRKYYSSESGSSSDSDTESLETDSDSESDMSSSSYMSSSSDDRRKKRKRSKKDKYRRGKRKDKRRDKRRRKKDKRSKRKSKRESGSDSDSESNSDNSSEGENIGAQHKGLKRKDNSQKNAETKSPLVAEKDLPPAHHEKEEMGMLENEEKLSKENGERRNNGIGGADYGSDRSEERQPDVMDDHSGKTSRSRSVSPKRPMSKSMSISPRRSASKSPSVTPKRRLSKSPSVRSPPPSQRSLSRSPARSISRSPSRSISRSPVRGRNGRSVNRSPVRGRNGRSVSRSPVRGRNGRSVRRSPVRGRNGRSVRRSPVRGRNGRSVSRSPVRGRNGRNVNRTPVRGGNGKSVSRSPVRTRSLKSVSRSPVRTRSLRSVSKSPVRARSQSHRSRSSPRAPSGKTISRSPVRVLRKSISRSPVRSPARSLSRSSGWVPSKKSISRSPVRAPSRSIRRSYSRSPSPVRRTRTPRGRSVSRSVSPDASPKRIRRGRGFSERYSYARRYRTPSRSPVRSYRYNGRNDRDRYSSYRRFSPRRFRSPPPRGRTPPRYRSRRSRTPSVSRSPRYRARRYSRSRSPVRSRSPVRSRSPVDRSRPTRVERRASSSRSRSPSKSRSRSRSRSSVESLPRASRDSRSRSSSRSPDGKKGLVSYGDGSPY 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00624 850 MobiDBLite consensus disorder prediction 521 578 - -
Gma06g00624 850 Gene3D - 1 174 IPR029000 -
Gma06g00624 850 MobiDBLite consensus disorder prediction 177 850 - -
Gma06g00624 850 MobiDBLite consensus disorder prediction 709 724 - -
Gma06g00624 850 MobiDBLite consensus disorder prediction 303 317 - -
Gma06g00624 850 MobiDBLite consensus disorder prediction 613 674 - -
Gma06g00624 850 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP63 1 356 - -
Gma06g00624 850 MobiDBLite consensus disorder prediction 328 355 - -
Gma06g00624 850 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 106 121 IPR002130 GO:0000413|GO:0003755
Gma06g00624 850 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 121 133 IPR002130 GO:0000413|GO:0003755
Gma06g00624 850 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Gma06g00624 850 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Gma06g00624 850 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 134 149 IPR002130 GO:0000413|GO:0003755
Gma06g00624 850 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 356 - -
Gma06g00624 850 MobiDBLite consensus disorder prediction 488 511 - -
Gma06g00624 850 SUPERFAMILY Cyclophilin-like 4 175 IPR029000 -
Gma06g00624 850 MobiDBLite consensus disorder prediction 778 799 - -
Gma06g00624 850 MobiDBLite consensus disorder prediction 390 486 - -
Gma06g00624 850 MobiDBLite consensus disorder prediction 676 696 - -
Gma06g00624 850 MobiDBLite consensus disorder prediction 184 198 - -
Gma06g00624 850 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 172 IPR002130 GO:0000413|GO:0003755
Gma06g00624 850 MobiDBLite consensus disorder prediction 242 277 - -
Gma06g00624 850 MobiDBLite consensus disorder prediction 810 834 - -
Gma06g00624 850 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 173 IPR002130 GO:0000413|GO:0003755
Gma06g00624 850 MobiDBLite consensus disorder prediction 367 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00624 Gma-Chr6 5638925 5644197 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00624 25 169 U-box Gene Family AT5G67530 38.095 4.96e-17 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00624 K09566 - gmx:100800303 349.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00624 06 5638925 5644197 Gma06g00624 06 5638925 5644197 ECH