Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00599 ATGGAACTTGAGTCGGGTCTTGCTCTCCCCACTCACAATTCCGTTGAGGAATTCAAGCTTAACAAGTCGAAACAGATAGTGAGTTTAGAGTTATGGAGACCCAGTTGCGGTTCAGATAGCGAAAAGCGTGTCAAACACAATAAGCGCAGCTTCGAAGAGTCCTTTGGACAATTTTTGAAACCTTTTCCTTTACTAGTATGGAGTGGACAGCCAAATGAAGAAGAAGACCGTAATGAAAAGGTGCAAAGAAACATTCACACACCAAACAAGAACGGTGATGAAGAAAACCATTTGGTGGGGTGGCCACCAGTTAAATCATGGAGGAGGAAAGAGCTCCATCGGCAGCAGTATCCTGCGAGAGGCCAAATTAGGAACGATAGGATTCAAGCTAATGAGAATCAAAGTAGAAGACCAAACTCTTTATATGTAAAGGTTAACATGGAAGGGGTAGCCATAGGAAGGAAAATCAATTTGAGGCTTTTCAATTCTTATCAGACACTTACAAGCAGCTTGATCAGCATGTTTGCTAAATACCAAAAATTTGAGGAAGTTGGAGAAAGTTACACACTCAACTTTCAAAACGAACAAGGGGATTGGCTGCAAGTAGGACATGTTCCATGGCAATCCTTCATTGGTACTGTGCGGCGTTTGGTGATACTGAGGAATGGAAGTGAAACTATTTGA 684 0.4211 MELESGLALPTHNSVEEFKLNKSKQIVSLELWRPSCGSDSEKRVKHNKRSFEESFGQFLKPFPLLVWSGQPNEEEDRNEKVQRNIHTPNKNGDEENHLVGWPPVKSWRRKELHRQQYPARGQIRNDRIQANENQSRRPNSLYVKVNMEGVAIGRKINLRLFNSYQTLTSSLISMFAKYQKFEEVGESYTLNFQNEQGDWLQVGHVPWQSFIGTVRRLVILRNGSETI 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00599 227 SUPERFAMILY CAD & PB1 domains 133 217 - -
Gma06g00599 227 Gene3D - 141 226 - -
Gma06g00599 227 ProSiteProfiles PB1 domain profile. 140 227 IPR000270 GO:0005515
Gma06g00599 227 Pfam AUX/IAA family 33 225 IPR033389 -
Gma06g00599 227 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 1 223 IPR003311 GO:0005634|GO:0006355
Gma06g00599 227 PANTHER AUXIN-RESPONSIVE PROTEIN IAA29 1 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00599 Gma-Chr6 5423675 5424987 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00599 132 219 B3 DNA Binding Superfamily AT1G59750 34.091 8.98e-10 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Gma06g00599 AUX_IAA 2.7e-34 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00599 K14484 - gmx:100783359 468.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00599 06 5423675 5424987 Gma06g00599 06 5423675 5424987 ECH