Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00593 ATGTTCGCCGAAGAGAATGGACTCAAGGGAGACCCTAGACTCCAAGCCATTTCCCAAGCCATCAGAGTCGTCCCTCACTTCCCCATACATGGAATAATGTTTCAAGACATAACGACATTGTTGTTGGATCACAAGGCGTTTAAAGACACGGTCGACATTTTTGTCGATCGTTACAGAGACATGCACATTTCCGTTGTTGCCGGAATTGAGGCTAGGGGGTTCATGTTTGGTCCCTCAATTGCGTTGGGCATTGGTGCAAAGTTTGTTCCTTTACGCAAACCACGGAAGCTGCCAGGTGAAGTAATTTCAGAAAAATATGCTCTAGAATATGGAACTGATTGCTTGGAGTTGCATGTTGGTGCTGTCCAGCCCGGTGAACGGGCCATAATCATTGATGACTTGGTGGCCACAGGTGGAACTCTGTCAGCAGGAGTAAAACTTCTAGAACGTGTTGGTGCTGAAGTGGTGGAATGTGCCTGTGTCATTGGTGTGCCTGATGTCAAGGGGCAGTGCAGGCGTATTGGAAAGCCACTTTATGTTCTTGTTGAGCCGCGTAAAGCAGATAAATGTTACCCAGATTGA 582 0.4725 MFAEENGLKGDPRLQAISQAIRVVPHFPIHGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMHISVVAGIEARGFMFGPSIALGIGAKFVPLRKPRKLPGEVISEKYALEYGTDCLELHVGAVQPGERAIIIDDLVATGGTLSAGVKLLERVGAEVVECACVIGVPDVKGQCRRIGKPLYVLVEPRKADKCYPD 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00593 193 Pfam Phosphoribosyl transferase domain 43 166 IPR000836 -
Gma06g00593 193 Gene3D - 6 184 IPR029057 -
Gma06g00593 193 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 1 189 - -
Gma06g00593 193 CDD PRTases_typeI 51 183 IPR000836 -
Gma06g00593 193 Hamap Adenine phosphoribosyltransferase [apt]. 17 184 IPR005764 GO:0003999|GO:0005737|GO:0006168
Gma06g00593 193 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 5-LIKE ISOFORM X1 1 189 - -
Gma06g00593 193 TIGRFAM apt: adenine phosphoribosyltransferase 18 175 IPR005764 GO:0003999|GO:0005737|GO:0006168
Gma06g00593 193 SUPERFAMILY PRTase-like 20 169 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00593 Gma-Chr6 5375205 5380231 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00593 11 183 PRT Gene Family AT1G27450 69.364 1.41e-87 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00593 K00759 - gmx:100810609 383.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00593 06 5375205 5380231 Gma06g00593 06 5375205 5380231 ECH
Gma04g00609 04 5562620 5566953 Gma06g00593 06 5375205 5380231 ECH
Gma04g00609 04 5562620 5566953 Gma06g00593 06 5375205 5380231 GST
Gma17g02019 17 36200047 36202538 Gma06g00593 06 5375205 5380231 PCT
Gma14g01086 14 14295331 14299027 Gma06g00593 06 5375205 5380231 PCT
Gma06g00593 06 5375205 5380231 Gma17g02019 17 36200047 36202538 PCT
Gma06g00593 06 5375205 5380231 Gma14g01086 14 14295331 14299027 PCT