Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00556 ATGGAAGAGTGTCACACGGTGTTCGGAAAGTACGAGATGGGGAGGCTTCTCGGCAAGGGGACGTTTGCCAAAGTGTATTACGGGAAGCAAATAAGCACGGGCGAGAACGTGGCAATCAAAGTGATCAACAAAGAGCAAGTGAGAAAAGAAGGAATGATGGAACAGATCAAACGTGAAATCTCCGTGATGCGTTTGGTGCGACACCCAAACGTGGTGGAAATCAAGGAAGTGATGGCCACAAAGACAAAAATCTTCTTCGTCATGGAATACGTGCGTGGCGGGGAACTCTTCGCCAAAATCTCCAAAGGCAAACTCAAAGAAGATCTCGCCCGCAAGTATTTTCAGCAGTTAATCAGTGCCGTTGATTACTGCCACAGCAGAGGAGTATCCCACCGTGATCTCAAACCAGAGAATCTTCTCCTCGACGAAGACGAAAACCTTAAAATCTCCGATTTCGGTCTCTCTGCGCTGCCGGAACAGCTTCGTTACGATGGGCTCCTCCACACACAGTGCGGCACCCCTGCCTACGTGGCACCCGAAGTGTTAAGAAAAAAAGGCTACGATGGTTCCAAAGCTGATATCTGGTCATGCGGCGTCGTTTTGTACGTTCTTCTCGCTGGCTTTCTTCCTTTCCAACACGAGAATCTCATGACGATGTATAACAAAGTTCTCAGAGCCGAGTTTGAGTTTCCACCGTGGTTTTCGCCTGATTCGAAGAGGCTAATCTCCAAGATTCTAGTGGCGGATCCCTCGAAGAGGACCGCGATTTCCGCCATAGCTCGCGTGTCGTGGTTCCGGAAGGGCTTTTCTTCGCTTTCCGCGCCGGACTTGTGTCAGTTGGAGAAACAAGAAGATGCCGTTACGGTTACGGTTACGGAGGAAGAGAATAATTCCAAGGTCCCCAAGTTCTTCAACGCGTTCGAGTTTATTTCTTCGATGTCTTCCGGGTTTGATCTCTCGGGGCTGTTTGAGAGTAAGCGGAAGACAGCGACGGTGTTCACGTCGAAGTGTTCGGCGGCGGCGATTGTGGCGAAGATTGCGGCGGCGGCGCGGGGGCTGAGTTTCCGCGTGGCGGAGGTTAAGGACTTCAAGATCCGGCTGCAGGGCGCGGCGGAGGGGAGGAAAGGGAGGCTGGCGGTCACGGCTGAGGTGTTCGAGGTGGCGCCGGAGGTCGCCGTTGTTGAGTTTTCGAAGTCCGCCGGCGACACGTTGGAATACGCGAAGTTCTGTGAGGAGGACGTGAGGCCCGCGCTGAAGGACATTGTTTGGACGTGGCAAGGGGATGCCACGTGTGCTGCTAACGTTCCCGCCTGTCACGGTGAAAGAGCACGAGAGAGGAGTAATATTTGTATTAAGATTAATGAATGTCTACAACAAGGAGTATATATTATtgtagtgtaa 1401 0.5175 MEECHTVFGKYEMGRLLGKGTFAKVYYGKQISTGENVAIKVINKEQVRKEGMMEQIKREISVMRLVRHPNVVEIKEVMATKTKIFFVMEYVRGGELFAKISKGKLKEDLARKYFQQLISAVDYCHSRGVSHRDLKPENLLLDEDENLKISDFGLSALPEQLRYDGLLHTQCGTPAYVAPEVLRKKGYDGSKADIWSCGVVLYVLLAGFLPFQHENLMTMYNKVLRAEFEFPPWFSPDSKRLISKILVADPSKRTAISAIARVSWFRKGFSSLSAPDLCQLEKQEDAVTVTVTEEENNSKVPKFFNAFEFISSMSSGFDLSGLFESKRKTATVFTSKCSAAAIVAKIAAAARGLSFRVAEVKDFKIRLQGAAEGRKGRLAVTAEVFEVAPEVAVVEFSKSAGDTLEYAKFCEEDVRPALKDIVWTWQGDATCAANVPACHGERARERSNICIKINECLQQGVYIIVV 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00556 466 Gene3D Kinase associated domain 1, KA1 299 424 - -
Gma06g00556 466 SMART serkin_6 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g00556 466 Pfam Protein kinase domain 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g00556 466 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 25-RELATED 1 436 - -
Gma06g00556 466 Gene3D Transferase(Phosphotransferase) domain 1 91 271 - -
Gma06g00556 466 PANTHER - 1 436 - -
Gma06g00556 466 Pfam NAF domain 301 358 IPR004041 GO:0007165
Gma06g00556 466 CDD CIPK_C 305 419 - -
Gma06g00556 466 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Gma06g00556 466 ProSiteProfiles NAF domain profile. 299 324 IPR018451 GO:0007165
Gma06g00556 466 CDD STKc_SnRK3 10 264 - -
Gma06g00556 466 ProSitePatterns Protein kinases ATP-binding region signature. 17 40 IPR017441 GO:0005524
Gma06g00556 466 ProSiteProfiles Protein kinase domain profile. 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g00556 466 Gene3D Phosphorylase Kinase; domain 1 1 90 - -
Gma06g00556 466 SUPERFAMILY Protein kinase-like (PK-like) 7 283 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00556 Gma-Chr6 4920570 4922704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00556 2 428 CBL-interacting serine-threonine protein kinases AT5G25110 70.370 0.0 638
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gma06g00556 Pkinase 2.6e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00556 - - gmx:100780478 832.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00570 04 5101658 5103707 Gma06g00556 06 4920570 4922704 GST