Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00555 ATGGAAATGGAACCGACGTGCGTCGACACTTCCCTCAACCTTAACGTTATTCCTTCCCCACACATCGACCACCTCGCGGGAGAAGTTTTGTTTGAAGAGTTGCGGCGTCTAAGCAGTGAGAACAAGAGGCTAACTGAGACGCTGAACCACTTGTGCGAGAGCTATGTTGCCTTGCAGAAACATTTGAGTGAATTCAGCCAACTTAGGAACGCAAATTTTGATAAAGAAGGAACTTGTGCAGTTCCGTCGCTAAAGAGAAAGCCCGAGAGTGAGAATTGTGTGAATCTGTTTGGTACTGAGTGCAACACCATCACAGAGGAAGAAACATTCAAAAGGCCCAAGCATAGCACCGAGCCAAAGGTTTCCAAAGTTCTTACACGGACAGATGCATCTGATACTGGCTTATATGTGAGGGACGGATATCAGTGGAGAAAATACGGTCAGAAAGTCACTAGAGATAACCCTTCTCCTAGGGCTTACTTCAAGTGTTCATATGCCCCTAGCTGTCCAGTAAAAAAGAAGGTGCAAAGAAGTGTAGAAGATCCAAGTGTGTTGGTAACAACTTACGAAGGGGAGCACAACCATGGGCAACAACATCAAACTGCAGAAATATCAATTAATTCATCAAGCAAAAGTGAAACACCTAGGCCTGCAGTTTCACCCTCAGCCATGAATATTCGGAGTAGTGCAGCAGCAGGTCCAATTGTAACACTTGACTTGGTCAAGTCAAAAGTTGTTGACATTAATGCGCAAAAGTCATCTCTCCAGCAGTTTTTAGTTCACCAAATGGCTACTTCTTTGACAAGAGATCCTAATTTCACAGCCGCACTTGCTTCTGCCATCTCTGGAAGAATTCTAGATGATACTTCTGTGGGAAAACGTTGA 885 0.4441 MEMEPTCVDTSLNLNVIPSPHIDHLAGEVLFEELRRLSSENKRLTETLNHLCESYVALQKHLSEFSQLRNANFDKEGTCAVPSLKRKPESENCVNLFGTECNTITEEETFKRPKHSTEPKVSKVLTRTDASDTGLYVRDGYQWRKYGQKVTRDNPSPRAYFKCSYAPSCPVKKKVQRSVEDPSVLVTTYEGEHNHGQQHQTAEISINSSSKSETPRPAVSPSAMNIRSSAAAGPIVTLDLVKSKVVDINAQKSSLQQFLVHQMATSLTRDPNFTAALASAISGRILDDTSVGKR 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00555 294 ProSiteProfiles WRKY domain profile. 139 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma06g00555 294 MobiDBLite consensus disorder prediction 192 222 - -
Gma06g00555 294 Gene3D WRKY domain 121 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma06g00555 294 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 287 - -
Gma06g00555 294 SUPERFAMILY WRKY DNA-binding domain 136 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma06g00555 294 Coils Coil 34 54 - -
Gma06g00555 294 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 287 IPR044810 GO:0003700
Gma06g00555 294 Pfam WRKY DNA -binding domain 139 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma06g00555 294 SMART WRKY_cls 137 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00555 Gma-Chr6 4902892 4904680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00555 8 285 WRKY Transcription Factor Family AT1G80840 44.595 3.04e-72 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma06g00555 WRKY 3.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00555 - - gmx:100127373 589.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00569 04 5085846 5087515 Gma06g00555 06 4902892 4904680 GST
Gma17g02121 17 38721498 38725532 Gma06g00555 06 4902892 4904680 PCT
Gma14g00941 14 10682164 10684359 Gma06g00555 06 4902892 4904680 PCT
Gma06g00555 06 4902892 4904680 Gma17g02121 17 38721498 38725532 PCT
Gma06g00555 06 4902892 4904680 Gma14g00941 14 10682164 10684359 PCT