Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00549 ATGGCTGCTTGCTCAAGAACTTCTCTTTTGCTCCTTTTCTTTCTCTTTGGATTCTCCGCAGCTAAGGAACTATTGGTTGGAGGCAAAATAGATGCTTGGAAGATTCCATCTTCTGAATCAGATTCCCTCAATCAATGGGCTGAAAGGTCTCGTTTCAGAGTCGGCGATCATCTTGTGTGGAAATATGAGAATGGGAAGGACTCAGTGTTGGAAGTAACAAGGGAAGATTATGCCAATTGCAGCACATCCAAGCCCATCAAAGAGTACAATGATGGAAACACAAAGGTGAAGCTAGAGCATGCTGGTCCATTCTACTTCATAAGTGGAGCAAAGGGGCACTGTGAGAAGGGACAAAAGTTGATTGTGGTGGTTATGTCTCCAAGGCACATTATTTCTCCAGCACCTTCTCCAACAGAGTTCCACTTTGAGGGTCCCGCTGTAGCTCCTACTAGCAGTGCCACAACGTTTCAAGTTGGCCTACTCACTGCTCTTGGAGTTTTGGCCATGTATGTGGTTTTTCTCAAGTAA 528 0.4508 MAACSRTSLLLLFFLFGFSAAKELLVGGKIDAWKIPSSESDSLNQWAERSRFRVGDHLVWKYENGKDSVLEVTREDYANCSTSKPIKEYNDGNTKVKLEHAGPFYFISGAKGHCEKGQKLIVVVMSPRHIISPAPSPTEFHFEGPAVAPTSSATTFQVGLLTALGVLAMYVVFLK 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00549 175 Gene3D - 20 129 IPR008972 -
Gma06g00549 175 SUPERFAMILY Cupredoxins 21 125 IPR008972 -
Gma06g00549 175 PANTHER BLUE COPPER PROTEIN 5 168 IPR039391 GO:0009055
Gma06g00549 175 CDD OsENODL1_like 22 125 IPR041846 -
Gma06g00549 175 PANTHER EARLY NODULIN-LIKE PROTEIN 3 5 168 - -
Gma06g00549 175 Pfam Plastocyanin-like domain 33 118 IPR003245 GO:0009055
Gma06g00549 175 ProSiteProfiles Phytocyanin domain profile. 22 126 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00549 Gma-Chr6 4853316 4854392 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00549 6 159 Phytocyanin Superfamily AT2G25060 57.419 1.01e-62 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00549 - - gmx:100527928 350.517
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00549 06 4853316 4854392 Gma06g00549 06 4853316 4854392 ECH
Gma04g00562 04 5031941 5033131 Gma06g00549 06 4853316 4854392 GST
Gma17g02131 17 38843170 38844343 Gma06g00549 06 4853316 4854392 PCT
Gma14g00933 14 10498634 10500013 Gma06g00549 06 4853316 4854392 PCT
Gma06g00549 06 4853316 4854392 Gma17g02131 17 38843170 38844343 PCT
Gma06g00549 06 4853316 4854392 Gma14g00933 14 10498634 10500013 PCT