Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00537 ATGGGTTATCTCAATTCAGTTTTGTCATCTTCAAGCGAGGTTCATGCTGCAGGTGATGCAATTGCGAGTGGTGGGGGGCTAAGTCACAATAGAAAATTCAGCTATGGGTATGCTAGCTCTCCTGGCAAGAGATCTTCAATGGAAGATTTTTATGAGACAAGAATTGATGGTGTTGATGGTGAAGTCGTTGGCCTTTTCGGAGTTTTTGATGGTCATGGTGGTGCTCGTGCTGCTGAGTATGTCAAGAAAAACCTGTTTAGTAATTTAATCAGTCACCCAAAATTCATTTCTGACACCAAATCAGCAATAACTGATGCATATAATCATACCGATTCTGAGTTGCTGAAATCAGAAAATAGCCATAATAGAGATGCTGGATCAACTGCTTCCACTGCTATTTTAGTTGGTGACCGCTTGCTTGTTGCAAATGTTGGGGATTCCAGAGCTGTTATATGCAGGGGTGGTAATGCCATTGCTGTTTCTCGAGATCACAAGCCTGACCAAACTGATGAGAGGCAAAGGATTGAAGAAGCAGGAGGCTTTGTTATGTGGGCTGGAACTTGGAGAGTTGGAGGTGTTCTTGCTGTTTCTCGTGCGTTTGGTGATAGACTCCTGAAGCAGTATGTTGTTGCTGATCCAGAAATTCAGGAAGAAAAAATTGACAGCTCCCTTGAGTTTCTTATTCTGGCCAGTGACGGGCTATGGGATGTTGTCACAAATGAGGAAGCTGTTGCTATGATTAAATCAATTGAGGATGCTGAGGAGGCAGCAAAGAGGCTGATGCAAGAAGCATATCAGAGAGGTAGTGCTGACAATATCACATGTGTTGTCGTTCGTTTCTTGATGAACCAAGGTGGATCCAAAGACAAAGAGGTAGTAGCTCCTCCTCATAATAGTAGCTCTGCCAGTAGGAATCCTTCAGTAGAAGGTTTGTGTGATAGGTGA 945 0.4339 MGYLNSVLSSSSEVHAAGDAIASGGGLSHNRKFSYGYASSPGKRSSMEDFYETRIDGVDGEVVGLFGVFDGHGGARAAEYVKKNLFSNLISHPKFISDTKSAITDAYNHTDSELLKSENSHNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEEAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKIDSSLEFLILASDGLWDVVTNEEAVAMIKSIEDAEEAAKRLMQEAYQRGSADNITCVVVRFLMNQGGSKDKEVVAPPHNSSSASRNPSVEGLCDR 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00537 314 ProSiteProfiles PPM-type phosphatase domain profile. 34 280 IPR001932 -
Gma06g00537 314 SUPERFAMILY PP2C-like 28 280 IPR036457 -
Gma06g00537 314 Pfam Protein phosphatase 2C 62 273 IPR001932 -
Gma06g00537 314 PANTHER ALPHABET, ISOFORM E-RELATED 3 312 - -
Gma06g00537 314 SMART PP2C_4 24 278 IPR001932 -
Gma06g00537 314 CDD PP2Cc 33 280 IPR001932 -
Gma06g00537 314 SMART PP2C_SIG_2 30 280 IPR001932 -
Gma06g00537 314 ProSitePatterns PPM-type phosphatase domain signature. 65 73 IPR000222 GO:0043169
Gma06g00537 314 Gene3D - 25 284 IPR036457 -
Gma06g00537 314 Coils Coil 243 267 - -
Gma06g00537 314 MobiDBLite consensus disorder prediction 288 314 - -
Gma06g00537 314 PANTHER PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C 3 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00537 Gma-Chr6 4762932 4766827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00537 1 286 PP2C-type Phosphatase Gene Family AT4G31750 88.811 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00537 K17506 - gmx:100807396 615.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00537 06 4762932 4766827 Gma06g00537 06 4762932 4766827 ECH
Gma04g00546 04 4917739 4922441 Gma06g00537 06 4762932 4766827 GST