Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00532 ATGAATGGAGACACTGAGGAGCAACCTTATTCAGCTGAAACAACGGTGTGGATACGTTGTGATGTATATGACACAGGCATAGGAATACCAGAAGATGCTATACCAACCTTATTTAAAAGGTACATGCAAGTCAGTGCAGACCACACTCGAAAGTATGGTGGCACAGGGCTAGGACTAGCAATATGCAAACAACTGGTTGAGTTGATGGGGGGTCAACTAACAGTTTCTAGCAAAGAACACTATGGTTCTACTTTCACTTTCATTCTTCCATACAAGGTTTCAATCGCTTGTGATCATTCTGATGATCCGGATGAGCTTTCTGATTTGGAGAATAATGATGTCGCATCTGATGATACAATAGAGAGTTTCTTCCAATTCCAACCACGCACTTTGGGCTCTCTTTTCTCTTCTAATGGATCTAGCAGGACACAGAAGTTATTAACACACAAAATTGGCTACACCAGCTCACATAAACTTGGTGGATTTTCTGAGAGTTTATATTCATTCCCCTCCAATGATATCATGTCAAAAGGGACATGTTCAGTTGATGATGCATCTTCTGTGGTTGATGCTCCGGAGACGTCTGAATTGGCTAGTTCATCTGGTCACAGCCTAGAAACAAAGAACAAAAGTTTGGTTAGAAGAGATAAACAGCATCAAGATAAGGCTCGTGCTTGGTCCTTTAATGGTTATGCAGATTCCTCTGAAGTTACTGTGTCAAACGGAGAAATGGCTGGAGCAACAAAGTCAAGTGAACCCCAACAAACATGTCAGGGTCAAGGGAAGGCAAACACAACTACTCAATGTGTTACAAGCAGCAGCACATCAGAAGTAACCAAATCCACAATAAAGCCTAAGATCCTTCTTGTTGAAGATAACAAGATTAATGTCATGGTGACACAGTCCATGATGAAGCAATTAGGCCATAGCATAGATGTTGTGAACAATGGAGTGGAAGCAGTACGTGCAGTTCAGCGCCACACTTATGACCTGATTCTGATGGATGTCTGCATGCCAGTGAGAAAAAGAGAAAGGATGGCAAAGATTCGGGAAGAGATTGCTGTTCAGAAAGCCAAGGAAACAGAACTGAATAAAACCATTCAAATTACAGAGGAGACTATGCGAGCAAAACAAATGTTGGCAACAATGTCTCATGAGATAAGATCTCCATTGTCTGGGGTTGTTAGCATGGCTGAAATTCTTTCTAACACAAAACTCGATTGGGAGCAAAGACAACTCCTGGATGTCATGCTATCTTCTGGAGATTTGGTTCTTCAAATTATAAATGACATACTTGATCTTTCCAAGGTCGAGTCAGGAGTGATGAAATTGGAAGCTACAAAATTCCGGCCAAGAGAGGTAGTCAAGCATGTACTCCAGACCGCTGTGGTTTCATTGCAGAAAATATTAACCTTAGAAGGACATGTAGCAGATGATGTACCTATTGAGGTCATTGGTGATGTTTTAAGGTTGCGGCAAATTCTCACAAATTTAATTAGCAATGCCATCAAGTTTACCCATGAAGGCAGAGTTGGAATAAACCTTTACGTTGTGCCAAAGCCTAATTTTGCAAAAGCAGAAGACATCCAAATGATGACTCCAAACCAATCAACTATGTCAGTGAATGGTGTAAAAGAAGAGAAACATCTCTCAAAACCTCAAAGTGGCAATGATGGAAATCTTCTTGATGGTTGTCAAAAACATGACGACCATCCCAGTCAAAACCATGCATTCAATGACGAATGTGGATCTCCGGCCAAAAGTGAATGCTCAATGAATGGAGACACTGAGGAGCAACCTTATTCAGCTGAAACAACGGTGTGGATACGTTGTGATGTATATGACACAGGCATAGGAATACCAGAAGATGCTATACCAACCTTATTTAAAAGGTACATGCAAGTCAGTGCAGACCACACTCGAAAGTATGGTGGCACAGGGCTAGGACTAGCAATATGCAAACAACTGgttgagttgatggggggtcaactaacagtttctagcaaagaacactatggttctactttcactttcattcttccatacaaggtttcaatcgcttgtgatcattctgatgatccggatgagctttctgatttggagaataatgatgtcgcatctgatgatacaatagagagtttcttccaattccaaccacgcactttgggctctcttttctcttctaatggatctagcaggacacagaagttattaacacacaaaattggctacaccagctcacataaacttggtggattttctgagagtttatattcattcccctccaatgatatcatgtcaaaagggacatgttcagttgatgatgcatcttctgtggttgatgctccggagacgtctgaatcggctagttcatctggtcacagcctagaaacaaagaacaaaagtttggttagaagagataaacagcatcaagataaggctcgtgcttggtcctttaatggttatgcagattcctctgaagttactgtgtcaaacggagaaatggctggagcaacaaagtcaagtgaaccccaacaaacatgtcagggtcaagggaaggcaaacacaactactcaatgtgttacaagcagcagcacatcagaagtaaccaaatccacaataaagcctaagatccttcttgttgaagataacaagattaatgtcatggtgacacagtccatgatgaagcaattaggccatagcatagatgttgtgaacaatggagtggaagcagtacgtgcagttcagcgccacacttatgacctgattctgatggatgtctgcatgccagttatggatggtcttcaagcAACAAAACTGATTCGGACTTTTGAGGAAACAGGCAATTGTGATGCTGCAAGAAGTTCGGGAATTGAGGAAAGTCTACCAGATCCAGATTATGAATGTTATGTACCATTTACAAAGCGGGTCCCCATTGTTGCGatgacagcaaatgctttgtcagagagtgctgaagagtgttttgcaaatgagtga 2997 0.2903 MNGDTEEQPYSAETTVWIRCDVYDTGIGIPEDAIPTLFKRYMQVSADHTRKYGGTGLGLAICKQLVELMGGQLTVSSKEHYGSTFTFILPYKVSIACDHSDDPDELSDLENNDVASDDTIESFFQFQPRTLGSLFSSNGSSRTQKLLTHKIGYTSSHKLGGFSESLYSFPSNDIMSKGTCSVDDASSVVDAPETSELASSSGHSLETKNKSLVRRDKQHQDKARAWSFNGYADSSEVTVSNGEMAGATKSSEPQQTCQGQGKANTTTQCVTSSSTSEVTKSTIKPKILLVEDNKINVMVTQSMMKQLGHSIDVVNNGVEAVRAVQRHTYDLILMDVCMPVRKRERMAKIREEIAVQKAKETELNKTIQITEETMRAKQMLATMSHEIRSPLSGVVSMAEILSNTKLDWEQRQLLDVMLSSGDLVLQIINDILDLSKVESGVMKLEATKFRPREVVKHVLQTAVVSLQKILTLEGHVADDVPIEVIGDVLRLRQILTNLISNAIKFTHEGRVGINLYVVPKPNFAKAEDIQMMTPNQSTMSVNGVKEEKHLSKPQSGNDGNLLDGCQKHDDHPSQNHAFNDECGSPAKSECSMNGDTEEQPYSAETTVWIRCDVYDTGIGIPEDAIPTLFKRYMQVSADHTRKYGGTGLGLAICKQLVELMGGQLTVSSKEHYGSTFTFILPYKVSIACDHSDDPDELSDLENNDVASDDTIESFFQFQPRTLGSLFSSNGSSRTQKLLTHKIGYTSSHKLGGFSESLYSFPSNDIMSKGTCSVDDASSVVDAPETSESASSSGHSLETKNKSLVRRDKQHQDKARAWSFNGYADSSEVTVSNGEMAGATKSSEPQQTCQGQGKANTTTQCVTSSSTSEVTKSTIKPKILLVEDNKINVMVTQSMMKQLGHSIDVVNNGVEAVRAVQRHTYDLILMDVCMPVMDGLQATKLIRTFEETGNCDAARSSGIEESLPDPDYECYVPFTKRVPIVAMTANALSESAEECFANE 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00532 998 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 10 340 - -
Gma06g00532 998 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 340 997 - -
Gma06g00532 998 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 368 440 IPR036097 GO:0000155|GO:0007165
Gma06g00532 998 Gene3D - 439 687 IPR036890 -
Gma06g00532 998 CDD HisKA 374 436 IPR003661 GO:0000155|GO:0007165
Gma06g00532 998 Gene3D - 341 438 - -
Gma06g00532 998 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 16 93 IPR036890 -
Gma06g00532 998 SMART HisKA_10 375 440 IPR003661 GO:0000155|GO:0007165
Gma06g00532 998 PRINTS Bacterial sensor protein C-terminal signature 53 71 IPR004358 GO:0016310|GO:0016772
Gma06g00532 998 PRINTS Bacterial sensor protein C-terminal signature 77 90 IPR004358 GO:0016310|GO:0016772
Gma06g00532 998 PRINTS Bacterial sensor protein C-terminal signature 18 32 IPR004358 GO:0016310|GO:0016772
Gma06g00532 998 CDD HATPase_EvgS-ArcB-TorS-like 13 90 - -
Gma06g00532 998 MobiDBLite consensus disorder prediction 243 266 - -
Gma06g00532 998 Pfam His Kinase A (phospho-acceptor) domain 377 440 IPR003661 GO:0000155|GO:0007165
Gma06g00532 998 ProSiteProfiles Response regulatory domain profile. 286 462 IPR001789 GO:0000160
Gma06g00532 998 ProSiteProfiles Histidine kinase domain profile. 382 684 IPR005467 -
Gma06g00532 998 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 16 91 IPR003594 -
Gma06g00532 998 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 486 682 IPR003594 -
Gma06g00532 998 Gene3D - 2 96 IPR036890 -
Gma06g00532 998 CDD REC_hyHK_CKI1_RcsC-like 287 340 - -
Gma06g00532 998 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 470 681 IPR036890 -
Gma06g00532 998 MobiDBLite consensus disorder prediction 191 218 - -
Gma06g00532 998 Pfam Response regulator receiver domain 287 340 IPR001789 GO:0000160
Gma06g00532 998 Pfam Response regulator receiver domain 878 947 IPR001789 GO:0000160
Gma06g00532 998 SMART REC_2 285 400 IPR001789 GO:0000160
Gma06g00532 998 SMART REC_2 876 997 IPR001789 GO:0000160
Gma06g00532 998 Gene3D - 870 998 - -
Gma06g00532 998 MobiDBLite consensus disorder prediction 192 207 - -
Gma06g00532 998 MobiDBLite consensus disorder prediction 778 818 - -
Gma06g00532 998 PANTHER HISTIDINE KINASE CYTOKININ RECEPTOR 10 340 - -
Gma06g00532 998 PANTHER HISTIDINE KINASE CYTOKININ RECEPTOR 340 997 - -
Gma06g00532 998 CDD HATPase_EvgS-ArcB-TorS-like 491 681 - -
Gma06g00532 998 MobiDBLite consensus disorder prediction 567 597 - -
Gma06g00532 998 MobiDBLite consensus disorder prediction 778 798 - -
Gma06g00532 998 Gene3D - 278 340 - -
Gma06g00532 998 SMART HKATPase_4 4 93 IPR003594 -
Gma06g00532 998 SMART HKATPase_4 486 684 IPR003594 -
Gma06g00532 998 CDD REC_hyHK_CKI1_RcsC-like 878 996 - -
Gma06g00532 998 MobiDBLite consensus disorder prediction 834 867 - -
Gma06g00532 998 ProSiteProfiles Histidine kinase domain profile. 22 93 IPR005467 -
Gma06g00532 998 MobiDBLite consensus disorder prediction 799 814 - -
Gma06g00532 998 SUPERFAMILY CheY-like 285 345 IPR011006 -
Gma06g00532 998 SUPERFAMILY CheY-like 876 996 IPR011006 -
Gma06g00532 998 ProSiteProfiles Response regulatory domain profile. 877 998 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00532 Gma-Chr6 4621910 4627532 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00532 591 997 Histidine Kinase Gene Family AT5G10720 48.905 1.60e-110 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma06g00532 HATPase_c 5.7e-28 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00532 - - gmx:100819520 1281.93