Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00522 ATGGAACCCGATGGCGATGATTTTCCATCGTTGGATTTCGACATTGATTCACCAGACCATAGACAGGACCAAAGTAAAAAACGAAAGCATACTGATAATTATGCGTCTCTGGAATCGCCTTGTTCCAACACGAACCCCAGAGGCTATCAGATAGAGGTGTATGAAGTTGCAAGGAGAAGGAACACAATAGCTGTGTTGGATACAGGGTCTGTTCATCTTGTCAACCAGCAATTCAAGAATATGAAATTTCTGACTGATTTTCAAGTTGAGGAATACTATGGAGCTAAAGGAGTTGATACATGGAGTTTGAAGATGTGGGAGAAAGTGATTAGTAACAATGATACTATTGCTGACTGTGTTGAAGCTCTGATAGGAGCATACTATGTAGATGGTGGACTCTTTGCTTCACTTAATGTGATGAAATGGCTTGGGATTGGTGTTGAACTTGAACTATCATCACTTGATGAAGCAATCACTGCTGCATCTCTGAGTACATGTGTGCCAATAGAAAGTGATATTGCAAGCCTTGAAAAGAAAATTGAGTATGAATTTTCAGTCAAGGGACTCTTACTGGAGGCAATCACACATTTGTCTGAGAAAGAACTTGGGATTGGCTGCTGTTATGAGAGGCTTAAATTTCTTGGTGACTCGGTATTGGACCTGCTTATCACATGGCATCTTTATCAGAGTCACACAGATATTGATCCAGGGGTGTTGGCTGACTTACGTTCTGCTTCTGTCAATAATGACAATTTTGCTCAAGTTGCTGTTAGACATAACCTTCACCAGCACCTTCTACATAGCTCAGGATTATTAGTGAGCCAGATATTAGAATATGTGAAGGTCATTTCTGAATCAGATCCCAGATCACTTCCAAGTATTAGAGCTCCCAAGGCACTTGGAGATGTAGTGGAAAGTATTGTCGGGCCTATACTAATTGGTACCAAGCTAAGTCTTGACCAAGTGTGGAACGTTTTCTATCCTCTATTATCTCCCATTGTTACTCCTGATAAACTTGAATTGCCTCCATTTCGTGAATTAAATGAATTATGTGATTCACTTGGGCATTTTGTAAAAGTAAAAGAAAATTGTGAAAAAATGGGATCAGCAATGCATGTTGAGGTTAGTGTACAGCTTCCAAATGCCCTATTGGTTCGTGAAGGAAAGGGGCCAAATAAAAAAACTGCAAAAGGAGAAGCTGCTTTTCATTTGTTGAAGGATCTTGAGAAGCGGGGAATTTTACATGGTAGTCTCATGTCCAAGGGAAAAAGAGACAATCCTGACCATATCTATGATTCATTTCATCTCAAAAGGGATTCTAGTATTTGTTCTTCTCTAATTGAAGAACATTCCTCAGAGCCAGCATCACATAAAAGGCACACATTGGATGAAACTAACTTAACTGCATTTAATTGA 1416 0.3955 MEPDGDDFPSLDFDIDSPDHRQDQSKKRKHTDNYASLESPCSNTNPRGYQIEVYEVARRRNTIAVLDTGSVHLVNQQFKNMKFLTDFQVEEYYGAKGVDTWSLKMWEKVISNNDTIADCVEALIGAYYVDGGLFASLNVMKWLGIGVELELSSLDEAITAASLSTCVPIESDIASLEKKIEYEFSVKGLLLEAITHLSEKELGIGCCYERLKFLGDSVLDLLITWHLYQSHTDIDPGVLADLRSASVNNDNFAQVAVRHNLHQHLLHSSGLLVSQILEYVKVISESDPRSLPSIRAPKALGDVVESIVGPILIGTKLSLDQVWNVFYPLLSPIVTPDKLELPPFRELNELCDSLGHFVKVKENCEKMGSAMHVEVSVQLPNALLVREGKGPNKKTAKGEAAFHLLKDLEKRGILHGSLMSKGKRDNPDHIYDSFHLKRDSSICSSLIEEHSSEPASHKRHTLDETNLTAFN 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00522 471 SUPERFAMILY dsRNA-binding domain-like 343 416 - -
Gma06g00522 471 Gene3D - 342 411 - -
Gma06g00522 471 ProSiteProfiles Ribonuclease III family domain profile. 116 132 IPR000999 GO:0004525|GO:0006396
Gma06g00522 471 MobiDBLite consensus disorder prediction 1 42 - -
Gma06g00522 471 CDD RIBOc 189 337 IPR000999 GO:0004525|GO:0006396
Gma06g00522 471 ProSiteProfiles Ribonuclease III family domain profile. 173 316 IPR000999 GO:0004525|GO:0006396
Gma06g00522 471 SMART riboneu5 188 339 IPR000999 GO:0004525|GO:0006396
Gma06g00522 471 PANTHER ENDORIBONUCLEASE DICER HOMOLOG 3 115 440 - -
Gma06g00522 471 Pfam Dicer dimerisation domain 347 424 - -
Gma06g00522 471 MobiDBLite consensus disorder prediction 448 471 - -
Gma06g00522 471 Gene3D Ribonuclease III domain 15 143 IPR036389 GO:0004525|GO:0006396
Gma06g00522 471 Pfam Ribonuclease III domain 209 313 IPR000999 GO:0004525|GO:0006396
Gma06g00522 471 PANTHER DICER-RELATED 70 109 - -
Gma06g00522 471 Gene3D Ribonuclease III domain 162 336 IPR036389 GO:0004525|GO:0006396
Gma06g00522 471 PANTHER ENDORIBONUCLEASE DICER HOMOLOG 3 70 109 - -
Gma06g00522 471 PANTHER DICER-RELATED 115 440 - -
Gma06g00522 471 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 387 410 IPR014720 -
Gma06g00522 471 MobiDBLite consensus disorder prediction 13 34 - -
Gma06g00522 471 SUPERFAMILY RNase III domain-like 107 146 IPR036389 GO:0004525|GO:0006396
Gma06g00522 471 SUPERFAMILY RNase III domain-like 171 336 IPR036389 GO:0004525|GO:0006396
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00522 Gma-Chr6 4432738 4438692 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00522 K11592 - gmx:100814732 693.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00522 06 4432738 4438692 Gma06g00522 06 4432738 4438692 ECH
Gma04g00531 04 4722892 4742602 Gma06g00522 06 4432738 4438692 ECH
Gma17g00424 17 3424398 3433186 Gma06g00522 06 4432738 4438692 ECH
Gma13g00948 13 23631000 23641077 Gma06g00522 06 4432738 4438692 ECH
Gma15g01706 15 18293998 18309836 Gma06g00522 06 4432738 4438692 ECH
Gma09g00677 09 7974289 7990521 Gma06g00522 06 4432738 4438692 ECH
Gma04g00531 04 4722892 4742602 Gma06g00522 06 4432738 4438692 GST