Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00517 ATGATGCACATGACCTTCTACTGGAGCAGAAAGGTGAATCTCCTAATCGATTCATGGAAGACCAACGATTGGACGGACTATCTCCTCACTCTGCTCGCGTGCCTCGTCGTCGCCGCCTTCTACCAGTTCCTCGAGAATCGCCGCATCCGCCTCAAGCTCATCGGCTCCGGAAAGCCCTTCCCGGCGGAGATCGAGGCCCCTCTTCTGCGGCGGAAGCTCGCCGGAAACCGCGTCAAGGTGGGCGTGAAGGTCGCCGGAGCGTTTCTCTTCGGGCTGAGCTCCGCGGTCGGGTACTTGTTGATGTTGTCGGTGATGTCCTTCAACGGAGGGGTGTTTGTGGCCATCGTCGTGGGTCTCGCTGTTGGTTACTTCTTCTTCAGGAACGAGGGCGAAGATTCCCTTGTTGTTGATACTTCTTGTGCCTGTGCTTAA 432 0.5694 MMHMTFYWSRKVNLLIDSWKTNDWTDYLLTLLACLVVAAFYQFLENRRIRLKLIGSGKPFPAEIEAPLLRRKLAGNRVKVGVKVAGAFLFGLSSAVGYLLMLSVMSFNGGVFVAIVVGLAVGYFFFRNEGEDSLVVDTSCACA 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00517 143 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 143 IPR007274 GO:0005375|GO:0016021|GO:0035434
Gma06g00517 143 PANTHER CTR FAMILY COPPER TRANSPORTER 1 143 - -
Gma06g00517 143 Pfam Ctr copper transporter family 4 126 IPR007274 GO:0005375|GO:0016021|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00517 Gma-Chr6 4403843 4404663 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00517 1 143 Inorganic Solute Cotransporters AT5G20650 50.000 2.64e-47 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00517 K14686 - gmx:100805457 283.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00517 06 4403843 4404663 Gma06g00517 06 4403843 4404663 ECH
Gma04g00527 04 4696731 4697549 Gma06g00517 06 4403843 4404663 ECH
Gma17g00455 17 3735405 3736283 Gma06g00517 06 4403843 4404663 ECH
Gma13g00912 13 23292465 23293257 Gma06g00517 06 4403843 4404663 ECH
Gma07g00379 07 3411523 3416688 Gma06g00517 06 4403843 4404663 ECH
Gma04g00527 04 4696731 4697549 Gma06g00517 06 4403843 4404663 GST