Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00499 ATGGATGTTATTAATAAGCAGCAAGGTGGTCTAAAATGCGGTGAAGTAACCATGGCTGAGAAGAAGAGAGAAGTGATGGTGGCGATTCCAAACGAGCAGCAGCATAGCAGGGTGAATTCGCCACACAGAATATTAAACGACAACGAGGTTGCCGGAGCAAAGTCGCCACCTTTAAACTGTGCTTCCCCTGAGATAAGGTTCATGCCAAGCCCAAACAAGCCCCCAAAAGTTTTCACTTCCAACGCCAACCTCACTCGGCGAAAATCACTCACAAGGTCAGTGTATTCCAAACCCAAATCAAGGTTTGGTGAACAACCTTACCCCATTGATGGGACCCTTTTGGAAGATAATGCAAACTCAACTTTGCAAGAAAACTTGACTGTTGGTTCGCCATATAAAGCATCACCTAATAACAACAACAAAGCTGGGACTGTTAATAGAACATTCTCCATCCTGTCTGTGATCACTCCCAAGACACCGCTGATGGCGTCTCCCGGGCCGGCCGGGGAGGATTTCGATGAAATCATTTACAAGAAAGTTGAATTGAGTAAAAACAAGCGTAGTAGGAGACTGACTGCTAAGATGTTGTTTGAATGGTTTGTGTTTGTGTGCATTGCAAGTAGCTTGGTGGCTAGTTTAGCTGTTGGAAAACTTAAAAGGACCGAGATTTGGGGTTTGGGGTTTTGGAGGTTGTGTGTGCTTGTGATGGTGACCTTTTGCGGCATGTTGGTTACAAGATGGTTTATGCACATTGTTGTTTTCTTGATTGAGACCAACTTTTTGCTGAGGAAAAAGGTGCTGTATTTTGTCTATGGACTGAAGAAGTGTGTCCAGTTCTTCATTTGGCTTGGTTTGGTTCTTCTCACATGGGTGCTGTTGATTAACCGCGGGGTCCACCGAACTGAACTGGCCTCAAAGATTTTGAATGGGGTAACATGGACTCTTGTTTCCCTCCTCATTGGAGCATTCCTGTGGTTCGTGAAGACATTGTTGTTAAAGATCTTGGCATCGAATTTCCATGTCAAGTCTTTCTTTGATCGAATTCAAGAATCGCTCTTCCATCAGTACATTCTGCAGACTCTCTCTGGACCTCCACTTGTAGAAGAGGCTGAGAAGGTTGGGGCATCGTACAGTGTTGGTCATTTTAGTTTTAGGAGTACAGATGGTAAAGGTGGCACAAAGAAAGAGACTATTGATATCGCAAAGCTTCACCAGATGAAACAAGAGAAAGTTTCTGCGTGGACTATGAAGGTTTTGGTAGATGCAATGACAACTTCAGGGCTGTCCACAATCTCTAGTGCACTAGATGAAAGTTTCGATGAAGGAGAAAATGAACAAACTGATAAAGAGATTACTAATGAGATGGAAGCAACTGCTGCTGCCTATTACATTTTCAGGAATGTGGCTGCCCCTGGTTGCACGTACATTGATGAGGATGAACTTCGGAGGTTCATGATTAAGGAAGAAGTGCGAATGGTATATCCCCTATTGGCTGAAGCAGAAACGGGGCAAATTACTAGAAAGTCCTTAACAGACTGGTTGTTGAAGGTTTATCAAGAACGCAGAGCATTAGCACATGCCTTAAGTGACACTAAAACAGCTGTAAAACAACTAAACAAACTCGTGACCGTACTCCTAGTAGTGGTGAACATAATCGTGTGGCTTCTACTGATGGAGATTGCAACAACAAAAGTACTTGTATTCCTCTCATCACAGCTAGTACTTGCAGCTTTCATGTTTGGAAACACATGCAAGAACATATTTGAAGCTATCATCTTTGTGTTTGTAATGCATCCATTTGATGTTGGTGATCGGTGTGTTATTGATGGTGTTGAGCTATTGGTTGAAGAAATGAATATATTGACAACAGTCTTCTTGAAGCTTAATAATGAAAAGGTGTACTATCCAAACTCTGTCCTGGCCACAAAACCAATTAGCAATTATTACAGAAGCCCAGATATGGGTGACCGCGTAGATTTCTCCATTGATTTTATGACACCAGCAGAGAAGATTGGGGCACTGAAAGAAAAAATAAAAAGGTACGTGGAGAGAAATCCACAATACTGGCACTCCAATCATGGCTTAGTAGTGAAGGAGATTGAAGATGTAAACAAGATTAAGATGGCTCTCAATGTTACCCACACAATGAACTTTCAAGAGTTTGGGGAGAAAACCAAGCGAAGAACTGAATTGCCACAGCTCTTAAGTGGATCATGTTCCAGATTATCGATAACCTTATCCTCCCAATACCAGAATCTTCAGGCCAAGCCAGGTAAGCAAGCACAACACAACCCCGAAATGGCTTCTGCTTCTGTTCCCATGGCTTTCTCGCTGAGCTCTGTTATCAACAACAACAAGCCTTCATCCGAAGCCTTCTTCAGGCCACTACCCCTACGGCAACCAAAGAGGACCCTCTTCACCACAAAGGCAGTGTCAAACTCCAAGGCTCAAATCAATGCATCTTTGAAGGAGAAGGCAGTTGCAGGACTCACAGCAGCTTCTGTGACAGCATCTATGGTGGTTCCGGAGGTGGCTCATGCTGCTGGATATGAGTTCTCCCCTTCCCTCAAGAACTTTCTGCTAAGCATCTTTGCTGGTGGGTTTGTTCTAGTAGCCATATTTGGAGCCGTTATTGGGGTTTCCAACTTTGATCCGGTTAAGAGAACTTAA 2670 0.4348 MDVINKQQGGLKCGEVTMAEKKREVMVAIPNEQQHSRVNSPHRILNDNEVAGAKSPPLNCASPEIRFMPSPNKPPKVFTSNANLTRRKSLTRSVYSKPKSRFGEQPYPIDGTLLEDNANSTLQENLTVGSPYKASPNNNNKAGTVNRTFSILSVITPKTPLMASPGPAGEDFDEIIYKKVELSKNKRSRRLTAKMLFEWFVFVCIASSLVASLAVGKLKRTEIWGLGFWRLCVLVMVTFCGMLVTRWFMHIVVFLIETNFLLRKKVLYFVYGLKKCVQFFIWLGLVLLTWVLLINRGVHRTELASKILNGVTWTLVSLLIGAFLWFVKTLLLKILASNFHVKSFFDRIQESLFHQYILQTLSGPPLVEEAEKVGASYSVGHFSFRSTDGKGGTKKETIDIAKLHQMKQEKVSAWTMKVLVDAMTTSGLSTISSALDESFDEGENEQTDKEITNEMEATAAAYYIFRNVAAPGCTYIDEDELRRFMIKEEVRMVYPLLAEAETGQITRKSLTDWLLKVYQERRALAHALSDTKTAVKQLNKLVTVLLVVVNIIVWLLLMEIATTKVLVFLSSQLVLAAFMFGNTCKNIFEAIIFVFVMHPFDVGDRCVIDGVELLVEEMNILTTVFLKLNNEKVYYPNSVLATKPISNYYRSPDMGDRVDFSIDFMTPAEKIGALKEKIKRYVERNPQYWHSNHGLVVKEIEDVNKIKMALNVTHTMNFQEFGEKTKRRTELPQLLSGSCSRLSITLSSQYQNLQAKPGKQAQHNPEMASASVPMAFSLSSVINNNKPSSEAFFRPLPLRQPKRTLFTTKAVSNSKAQINASLKEKAVAGLTAASVTASMVVPEVAHAAGYEFSPSLKNFLLSIFAGGFVLVAIFGAVIGVSNFDPVKRT 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00499 889 PIRSF Memb_At2g17000 17 850 IPR016688 -
Gma06g00499 889 Gene3D Single helix bin 852 889 - -
Gma06g00499 889 Pfam Photosystem II reaction centre X protein (PsbX) 853 888 IPR009518 GO:0009523|GO:0015979|GO:0016020
Gma06g00499 889 Gene3D - 599 648 IPR023408 -
Gma06g00499 889 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 21 736 IPR016688 -
Gma06g00499 889 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 9 21 736 - -
Gma06g00499 889 SUPERFAMILY Sm-like ribonucleoproteins 589 648 IPR010920 -
Gma06g00499 889 Pfam Mechanosensitive ion channel 539 713 IPR006685 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00499 Gma-Chr6 4260454 4265382 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00499 18 756 Mechanosensitive Ion Channel Family AT5G12080 56.821 0.0 810
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00499 K22048 - gmx:100777617 1418.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00499 06 4260454 4265382 Gma06g00499 06 4260454 4265382 ECH
Gma04g00511 04 4535233 4536126 Gma06g00499 06 4260454 4265382 ECH
Gma04g00511 04 4535233 4536126 Gma06g00499 06 4260454 4265382 GST