Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00494 ATGGGTGATGACGACGACAATAACAACAACTCCTCCCGGTTTGTTCCATACACGTGTCGAGATCCATTTGTCAGTCCACTTCTCGATAACTTTTTTATCGAACCGGACCCTGCACTTGTCTATTTATTACCCGAACCGAACCTACAAAATGATGAACAGCAGTCCCTGCAGGGTGGTCATGTTTCCTCCACGGGTTCAACGATCCAAGATCAATCCCAGCAGCATTTTTGCAATGACAATTTTACCATTGGTGGAGGAGGAGTTCCTAACTACCAAGTAGCGGGGTCTTCCAAGAACAAGCGTACATATCCCTTCACTGATGTGGATATTGAACATCAATCCTTCAGGTATGACCTTAAAGCGGGTCCATCCAATCTGAATCAGTCTGAAAGTGGGATTATGGGTTCTCGTAATTGGCCTCCTATACCAAGGCCATTCTTTTGCACTTGCTGCCAAGTTCTAAGACAGACAATTCACACCAATGGTAATGATTTTGAGAGACTTGAAATACATGGGAGGATAGGGTTGATCAACCATATAATAATTCAGAATCAGAGTATTACGCCGGGTGATCCTCCATGTGACAATTATCAAATGATTGATTTCACCAACGGAACCCCTGCAGAAGTTAAGGGTTTCCTTGAAGATTACATTGCGCAGAAGGATAAATTAGGGTACATTATTGTGGAAGAAGCTTTTTCTGCGTTTTATGAAGCCCTCTGCACCAAATTAGATTGGATTGGAAAACGTACTAATAACGAAGACGATGATTTGATTCCACCAAATTTGGAGGAAGAAGAACCTGAGGCTGAGCCTGAGAAAAGAAGGCATAAACGAAGTCGCAAAGATCAGTCCGATAGGATAAATAATATGACATTGAATGATTTGAGTGGCGTGTTCCACATAACTATGAAGGCTGCAAAGGATGTATTAGAAATGTCTGTTACTGTAATTAAGGCAATTTGCCGCAAGTATCGTTTATATAAATGGCCCCAAAGACAGTTGCAACCACTTGCGAGGAGGTTGAAAGTGCTCAAAAGAGCATTAGAATCTTCACAAGATCCAGTGATAATACAGACAACTAACATGGAGGTTCGAAGAATTAAACAAGAAATGACTCAGTTGTGTGGTGGAGTTACCCCAACGGGTATAGAAATTCCTGAAGTTGAAGAGAATAGTGTTTAA 1185 0.4152 MGDDDDNNNNSSRFVPYTCRDPFVSPLLDNFFIEPDPALVYLLPEPNLQNDEQQSLQGGHVSSTGSTIQDQSQQHFCNDNFTIGGGGVPNYQVAGSSKNKRTYPFTDVDIEHQSFRYDLKAGPSNLNQSESGIMGSRNWPPIPRPFFCTCCQVLRQTIHTNGNDFERLEIHGRIGLINHIIIQNQSITPGDPPCDNYQMIDFTNGTPAEVKGFLEDYIAQKDKLGYIIVEEAFSAFYEALCTKLDWIGKRTNNEDDDLIPPNLEEEEPEAEPEKRRHKRSRKDQSDRINNMTLNDLSGVFHITMKAAKDVLEMSVTVIKAICRKYRLYKWPQRQLQPLARRLKVLKRALESSQDPVIIQTTNMEVRRIKQEMTQLCGGVTPTGIEIPEVEENSV 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00494 394 MobiDBLite consensus disorder prediction 268 288 - -
Gma06g00494 394 MobiDBLite consensus disorder prediction 255 288 - -
Gma06g00494 394 ProSiteProfiles RWP-RK domain profile. 272 358 IPR003035 -
Gma06g00494 394 PANTHER PROTEIN RKD4 39 378 IPR044607 GO:0003700
Gma06g00494 394 PANTHER RWP-RK DOMAIN PROTEIN 39 378 - -
Gma06g00494 394 Pfam RWP-RK domain 290 336 IPR003035 -
Gma06g00494 394 MobiDBLite consensus disorder prediction 50 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00494 Gma-Chr6 4215112 4217128 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00494 278 353 NLP Transcription Factor Family AT3G59580 31.579 1.11e-06 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Gma06g00494 RWP-RK 3.5e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00494 - - gmx:102669711 664.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00506 04 4504450 4506507 Gma06g00494 06 4215112 4217128 GST