Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00493 ATGAGTTTGGGAACCGCGGAGGACGAATCCGGTTCCGAAATCCACATCCCAGCCGAAATCGACTGGCACATGCTGGACAAATCCAAGTTCTTCTTCCTCGGCGCCGCCTTATTCTCCGGCGTGTCGTGCGCACTCTACCCCATGGTCGTGTTGAAGACGCGTCAGCAAGTTTCCTCCTCACGCTTCTCCTGCCTCAACATCTCCTGCGCCATTCTCCGCCACGAGGGCCTCCGCGGCTTCTACAAGGGCTTCGGAACCTCCCTCATGGGAACCATCCCCGCACGTGCGCTCTACATGGCCTCCCTCGAGATCACCAAAAGCAACGTCGCCACCGCCTTCCTCCAATTCGGCTTCTCCGAGACCACCGCCGTGGCTGTGGCCAACGCCGCCGCGGGCGTCACCTCCGCCATGGCTGCCCAGCTCGTGTGGACCCCAATTGATGTCGTGAGTCAGCGGCTCATGGTTCAGGGGAGTGGCGGGAGTAAAACCACAGTGCTCGCGAATCTCAATTCGGAAAATTACAGAAATGGGTTTGATGCTTTTAGGAAAATTATGTGTGCTGATGGAGCGATAGGCTTTTATAGAGGCTTTGGGATTTCTATATTGACTTATGCGCCTTCCAATGCGGTTTGGTGGACTTCTTATTCCATGGTTCATAGACTCATTTGGGGTGCTTTTGGTTCTTACATGGGAAATAACAATGGTAGAAAGGGAAATGAAAAGAATGATAGTAATAAGTATAGCAGGCCTGATTCGAAGGCAATGGTGGCGGTTCAAGGGTTGAGTGCTGTTATGGCAAGTGGGGTATCTGCGATTGTGACAATGCCGCTTGATACGATAAAGACGAGGTTGCAGGTGTTGGATCTTGAAGAGGGGAATGGGAGAAGGAGGCCTTTGACTTTTGTTCAGACGGTGAGGAATTTGGTGAAGGAAGGTGGGTTGCTTGCTTGTTACAGAGGATTGGGTCCGAGATGGGCTTCCATGTCCATGTCTGCCACAACTATGATTACTACTTATGAGTTTTTGAAAAGAATGTCTACCAAGAATCAAGAGGATTTGACTCCATCATAG 1071 0.5135 MSLGTAEDESGSEIHIPAEIDWHMLDKSKFFFLGAALFSGVSCALYPMVVLKTRQQVSSSRFSCLNISCAILRHEGLRGFYKGFGTSLMGTIPARALYMASLEITKSNVATAFLQFGFSETTAVAVANAAAGVTSAMAAQLVWTPIDVVSQRLMVQGSGGSKTTVLANLNSENYRNGFDAFRKIMCADGAIGFYRGFGISILTYAPSNAVWWTSYSMVHRLIWGAFGSYMGNNNGRKGNEKNDSNKYSRPDSKAMVAVQGLSAVMASGVSAIVTMPLDTIKTRLQVLDLEEGNGRRRPLTFVQTVRNLVKEGGLLACYRGLGPRWASMSMSATTMITTYEFLKRMSTKNQEDLTPS 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00493 356 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 221 IPR018108 -
Gma06g00493 356 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 1 352 - -
Gma06g00493 356 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Gma06g00493 356 SUPERFAMILY Mitochondrial carrier 23 342 IPR023395 -
Gma06g00493 356 ProSiteProfiles Solute carrier (Solcar) repeat profile. 254 345 IPR018108 -
Gma06g00493 356 Gene3D Mitochondrial carrier domain 29 354 IPR023395 -
Gma06g00493 356 Pfam Mitochondrial carrier protein 257 349 IPR018108 -
Gma06g00493 356 Pfam Mitochondrial carrier protein 36 109 IPR018108 -
Gma06g00493 356 Pfam Mitochondrial carrier protein 125 223 IPR018108 -
Gma06g00493 356 PRINTS Mitochondrial carrier protein signature 40 58 IPR002067 GO:0055085
Gma06g00493 356 PRINTS Mitochondrial carrier protein signature 81 99 IPR002067 GO:0055085
Gma06g00493 356 PRINTS Mitochondrial carrier protein signature 132 154 IPR002067 GO:0055085
Gma06g00493 356 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00493 Gma-Chr6 4206632 4208105 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00493 1 351 Chloroplast and Mitochondria Gene Families AT1G72820 65.722 7.91e-163 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00493 K15121 - gmx:100815068 670.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00493 06 4206632 4208105 Gma06g00493 06 4206632 4208105 ECH
Gma04g00504 04 4493514 4495008 Gma06g00493 06 4206632 4208105 ECH
Gma04g00504 04 4493514 4495008 Gma06g00493 06 4206632 4208105 GST