Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00490 ATGACAGATAAAAATCCAAGACCAGCAGATTCAGCTGACAATTATGTCACCAACCAATGGCCTTTGGAGCTCTCTGAGCACTTGAATTTTGATGATGATCAATGGCTAGACGATGACCCGGATTCATTTGTTTCGGGGCATGCCTTCAGCCATAACAATCAAGCCAATGAAGTTGGTGGCTTTGGAGGAAGTGGCACCCACTTTGAAGAGTCTTCTAGCAGAGACGTTGGCAATGAACGTGAGAAGAAGGAAGTCAGGGATAGAGTTGCATTCAAAACAAAGTCAGAGGTTGAAATACTGGACGACGGCTCCAAGTGGAGGAAGTACGGAAAGAAAATGGTGAAAAACAGCCCCAATCCAAGGAACTACTATAGGTGCTCAGTGGACGGATGGCAGGTCAAAAAGAGAGTTGAAAGAGATAAGGATGATCCAAGTTCCATTGGGCGTGGTTTAATGGAAGGGATGAAGCAGCTTGCGTACAACACTGCGGTGAAGCTCATTCTGGCTGCACTCGAACACAACTTGCTCCCTGACTTTGTCACCAGGAGATATGGTCGCTTCATGGCGGCTAACATCCTTCGCTCTGGCTACAAATCATCCTCCGAACTTCAACTCTCCGATCTCCTTCACTTTGCGCATTCTCTACAACAGATGCCCATAGCAATCGACACTGATGAGACAAATTCTCAACTTTATGAGTTGCCTACCGCTTTCTTCAAGTTGGTGCTCGGAAACAAACTCAATTTCAGCTGTTGCTATTTCCCTTCTGCCTCTATGACACTGGATGATGCTGAAGAAGCAATGTTGAAACTGTGCTGCGAGAGATCAAATTTGAAAGATGGTCATACAGTACTTGATTTGGGATGCGGTTGGGGATCACTGGTTTTGTACATTGCCAAGAAGTACACTAACTGCAGGGTTACAGGAATCAGCTATTCGACAACTCAAAAGACTTATATTGAGGAGAAGTGCCGGGATCTTCAGCTGCAAAATTTGAATATTATAGTTGCTGATATTGGCACATTTGAAATGGAGGCTTCTTACGACAGAATATTTTCCATAGAAATGTTTGAGCATATGAAGAACTATAAAGATCTTCTCAAGAAGATATCCAAATGGATGAAAGAGGATAGCCTTTTATTTGTTCATATCATGTGCCACAAAGCATTTGCCTACCACTTTGAGGACAAAAATGAAGATGACTGGATTACAAGATACTTCTTTGCTGGAGCAACTATGCCTTCTGCAAATCTACTTCTTTATTTCCAAGATGATGTTACAGTCATCAACCATTGGCTAGTAAATGGGAAACACTCCGCACAGACCAGTGAAGAATGGCTCAAAAGAATGGACCAGAAAATGACTTACATCAAGCCAATTATGGAATCAACGTATGGCAAGGATTCAGCTACCAAGTGGACTGCCTATTGGAGAGCATTCTTCATAGTTGGAGCAGAAACTTTTGCATATAATAACGGTGAAGAATGGATGATTGCACACTTCCTTTTCAAAAAGAAATAA 1521 0.4247 MTDKNPRPADSADNYVTNQWPLELSEHLNFDDDQWLDDDPDSFVSGHAFSHNNQANEVGGFGGSGTHFEESSSRDVGNEREKKEVRDRVAFKTKSEVEILDDGSKWRKYGKKMVKNSPNPRNYYRCSVDGWQVKKRVERDKDDPSSIGRGLMEGMKQLAYNTAVKLILAALEHNLLPDFVTRRYGRFMAANILRSGYKSSSELQLSDLLHFAHSLQQMPIAIDTDETNSQLYELPTAFFKLVLGNKLNFSCCYFPSASMTLDDAEEAMLKLCCERSNLKDGHTVLDLGCGWGSLVLYIAKKYTNCRVTGISYSTTQKTYIEEKCRDLQLQNLNIIVADIGTFEMEASYDRIFSIEMFEHMKNYKDLLKKISKWMKEDSLLFVHIMCHKAFAYHFEDKNEDDWITRYFFAGATMPSANLLLYFQDDVTVINHWLVNGKHSAQTSEEWLKRMDQKMTYIKPIMESTYGKDSATKWTAYWRAFFIVGAETFAYNNGEEWMIAHFLFKKK 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00490 506 Pfam WRKY DNA -binding domain 101 145 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma06g00490 506 Gene3D WRKY domain 87 148 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma06g00490 506 SMART WRKY_cls 100 150 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma06g00490 506 Pfam Mycolic acid cyclopropane synthetase 228 477 - -
Gma06g00490 506 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 155 506 - -
Gma06g00490 506 MobiDBLite consensus disorder prediction 54 71 - -
Gma06g00490 506 ProSiteProfiles WRKY domain profile. 95 147 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma06g00490 506 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 230 498 IPR029063 -
Gma06g00490 506 CDD AdoMet_MTases 283 385 - -
Gma06g00490 506 Gene3D Vaccinia Virus protein VP39 222 500 IPR029063 -
Gma06g00490 506 MobiDBLite consensus disorder prediction 54 84 - -
Gma06g00490 506 SUPERFAMILY WRKY DNA-binding domain 93 146 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma06g00490 506 PANTHER - 155 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00490 Gma-Chr6 4184809 4191375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00490 33 147 WRKY Transcription Factor Family AT5G26170 55.725 3.39e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma06g00490 CMAS 7.4e-41 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00490 - - gmx:100807054 732.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00490 06 4184809 4191375 Gma06g00490 06 4184809 4191375 ECH
Gma04g00500 04 4471178 4472569 Gma06g00490 06 4184809 4191375 GST