Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00486 ATGGATGTATCAAGAATTAAACTGATGTCAGATGCTGGGTTGTTATCCAATTCTATAACTAAGGTTTCCAATGAGACTTTTATAGGTTCAGATGAGGATCATGATGGTGGTCGTCATGAGGATGAAGTTGGTATTACAGCGGTCACAGCTCCAGAACAGCAAAGAGAAGGAGAAATTCCGATGTCGGATACAATATCCCAAAATATAAGCTCTCTGGTTGTTGGTGATGAAGTTTTAACCCCAGAAATTGAGGAGGATGATTTGATATCACTGGAAGGTGATCCAATTATTGATAGCTCTTCACTTTCAGTAGCCAGTGAGAATAGTAGTTTTTGTGGAGATGAGTTCATCAGTTCTGAGGTTTCTTCAGATTTAGGGACAACAAGTTCCATAGAGATAGGGAAGAGTGTCTCCACTGTCAAAATTGCTGCCAGGGCTACTGATTTGGGTGCGTCAAATGTAGAGGTTGATGTAGCAGTGAGCCTTGAAGAGACAGGGGTTAGATCTGGCCAAACGCCTACTACAGGTGTTTTTCATCAACTAACTCTGGAAAGATCTGTGAGTGGAACAGCTGGTAGAAGTGTTTTTGAATTAGATTGTACCCCGCTATGGGGATTTACTTCTGTGTGTGGAAAAAGACCTGAGATGGAAGACGCAGTTGCAACTGTACCTCGATTTTTGAAAATTCCTATTGAAATGCTAACTGGTGATAGATTACCTGATGGAATAAACAAATGTTTCAGTCAGCAGATAATACATTTCTTTGGAGTCTATGATGGGCATGGTGGCTCTCAGGTGGCAAAATATTGCCGGGAGCGCATGCATTTGGCCTTGGCTGAGGAAATAGAATCTGTCAAGGAAGGTCTATTAGTTGAAAATACCAAGGTTGATTGTCGAGATCTGTGGAAAAAAGCTTTCACCAATTGTTTTTTGAAGGTTGATTCTGAAGTTGGGGGGGGAGTTAATTGTGAGCCTGTTGCCCCAGAAACTGTTGGATCCACTTCTGTTGTTGCTATTATCTGTTCATCTCATATCATAGTTTCAAACTGTGGTGATTCAAGAGCGGTTCTATGTCGTGCCAAAGAACCCATGGCACTATCTGTTGATCATAAACCAAATCGAGATGATGAATATGCAAGAATTGAGGCTGCTGGAGGCAAGGTGATACAATGGAATGGCCACCGAGTATTTGGTGTTCTAGCAATGTCAAGGTCTATTGGTGATAGGTATTTGAAACCATGGATTATTCCGGACCCCGAGGTGACGTTTCTTCCTCGTGCAAAAGATGATGAGTGCCTCATTCTGGCCAGTGATGGCCTGTGGGATGTCATGACCAACGAAGAGGTGTGTGACATTGCTCGGCGGCGCTTACTTCTCTGGCACAAGAAAAATGGCTTGGCACTGCCCTCAGAAAGGGGAGAGGGAATTGATCCTGCTGCTCAAGCAGCTGCAGACTACCTATCGAACCGTGCTCTTCAGAAAGGAAGCAAAGACAACATCACTGTAATTGTGGTGGATTTGAAAGCTCAAAGGAAATTTAAGAGCAAGACATGA 1554 0.4311 MDVSRIKLMSDAGLLSNSITKVSNETFIGSDEDHDGGRHEDEVGITAVTAPEQQREGEIPMSDTISQNISSLVVGDEVLTPEIEEDDLISLEGDPIIDSSSLSVASENSSFCGDEFISSEVSSDLGTTSSIEIGKSVSTVKIAARATDLGASNVEVDVAVSLEETGVRSGQTPTTGVFHQLTLERSVSGTAGRSVFELDCTPLWGFTSVCGKRPEMEDAVATVPRFLKIPIEMLTGDRLPDGINKCFSQQIIHFFGVYDGHGGSQVAKYCRERMHLALAEEIESVKEGLLVENTKVDCRDLWKKAFTNCFLKVDSEVGGGVNCEPVAPETVGSTSVVAIICSSHIIVSNCGDSRAVLCRAKEPMALSVDHKPNRDDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPDPEVTFLPRAKDDECLILASDGLWDVMTNEEVCDIARRRLLLWHKKNGLALPSERGEGIDPAAQAAADYLSNRALQKGSKDNITVIVVDLKAQRKFKSKT 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00486 517 ProSitePatterns PPM-type phosphatase domain signature. 254 262 IPR000222 GO:0043169
Gma06g00486 517 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 87 517 - -
Gma06g00486 517 SMART PP2C_4 193 505 IPR001932 -
Gma06g00486 517 CDD PP2Cc 205 507 IPR001932 -
Gma06g00486 517 Pfam Protein phosphatase 2C 232 500 IPR001932 -
Gma06g00486 517 Gene3D - 190 517 IPR036457 -
Gma06g00486 517 ProSiteProfiles PPM-type phosphatase domain profile. 203 507 IPR001932 -
Gma06g00486 517 SUPERFAMILY PP2C-like 199 508 IPR036457 -
Gma06g00486 517 PANTHER ALPHABET, ISOFORM E-RELATED 87 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00486 Gma-Chr6 4151173 4155360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00486 57 517 PP2C-type Phosphatase Gene Family AT1G17550 53.797 7.54e-160 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00486 K14497 - gmx:100803321 1016.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00486 06 4151173 4155360 Gma06g00486 06 4151173 4155360 ECH
Gma04g00497 04 4430156 4450047 Gma06g00486 06 4151173 4155360 ECH