Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00475 ATGATGGGTGCCTCAGGAAAATGGGTAAAGGCATTAATCGGACTTAAGAAACCAGACAAAGAGGAGCATGTGAAAGAGGGTGGTGGTAAGAGCAAGAAGTGGAGGCTATGGAGGAGTTCTTCTGGGGACACGGGGGTTTCTTGGAAGGGTTTCAAAGGAGGAAACCACAGCGCGGTAGCTTCTTCTGAAGTGGGGTCTGATTcttctccacatgttgtagcagcagcagcagcaacaggcgcggctttcacagcagcagtagccactgtggttcgagctccacctAAAGATTTCAGACTCGTCAAGCAAGAATGGGCCGCTATAAGAATCCAAACTGCTTTCCGCGCCCTCTTGGCAAGAAGGGCTTTGAGGGCATTGAAGGGAGTGGTGAGGATTCAAGCTCTTGTTCGGGGGAGACAGGTGAGGAAGCAGGCTGCGGTGACATTGAGGTGCATGCAGGCCTTGGTTCGTGTTCAGGCCCGAGTTAGAGCCCGTCGTGTCAGGATGTCCATAGAGGGCCAAACTGTGCAGAACTTGCTCAATGAAAGACGCAGTAAGCTTGATCTTTTGAAGCAAGCTGAGGAAGGATGGTGTGACAGCAGAGGAACGTTGGAAGATGTTAAGACAAAGATACAAATGAGGCAAGAAGGAGCTTTCAAAAGGGAAAGAGCAATGGCTTACTCTCTTGCTCACAAACAATGCAGATCAACACCAAGCCCTAATCCACGAACACGTGCCTCATTTACCTCTCTTAAGAGTCATGAGATGAACAAAGCTAACTGTGGGTGGAGTTGGTTGGAGCGTTGGATGGCAGCAAAGCCTTGGGAGAGTAGATTGATGGAACAATCACAATCTCAGGCTGAAGCCTTAGATAAAACCCCACCTCCAAAGAAGTTTGTGGAATCCTTTGTGAGCTCTAATTCCAAACAAAGCATGGTCAAAGTCAAGAAGAACAACGTCACAACAAGGATTTCAGCTAGGCCACCCCTTGTTGGGCAAGCTACTCGCTCATCCTCAAGTCCAAGTTCTGAGTTTCGATACGATGAGAGTTCTGCATCATCTTCCATTTGTACATCCACAACACCAATGTCTGGGAACACTTGTGACAGGACTGAGGATAGTAATGGTAATGCTGTTGTTGCTAGGCCTAATTACATGAACCTGACTCAGTCCACAAAGGCAAAGCAAAAGACAAGTGGCAATCATGTATATAATAGAGCTCAGAGGCAGCAATCCATGGATGGGTTTCAATTCCTCAAGAGGGCAGCGGTTTTCTCCACTGCGGATTCTGACCCTTCAATCAACTTTTCTAGGCCACTTCACTTGGACAAGAGTTCAGTGATGGCACGGTGA 1353 0.4464 MMGASGKWVKALIGLKKPDKEEHVKEGGGKSKKWRLWRSSSGDTGVSWKGFKGGNHSAVASSEVGSDSSPHVVAAAAATGAAFTAAVATVVRAPPKDFRLVKQEWAAIRIQTAFRALLARRALRALKGVVRIQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQTVQNLLNERRSKLDLLKQAEEGWCDSRGTLEDVKTKIQMRQEGAFKRERAMAYSLAHKQCRSTPSPNPRTRASFTSLKSHEMNKANCGWSWLERWMAAKPWESRLMEQSQSQAEALDKTPPPKKFVESFVSSNSKQSMVKVKKNNVTTRISARPPLVGQATRSSSSPSSEFRYDESSASSSICTSTTPMSGNTCDRTEDSNGNAVVARPNYMNLTQSTKAKQKTSGNHVYNRAQRQQSMDGFQFLKRAAVFSTADSDPSINFSRPLHLDKSSVMAR 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00475 450 PANTHER IQ-DOMAIN 5-RELATED 2 449 - -
Gma06g00475 450 MobiDBLite consensus disorder prediction 323 375 - -
Gma06g00475 450 ProSiteProfiles IQ motif profile. 103 131 IPR000048 GO:0005515
Gma06g00475 450 ProSiteProfiles IQ motif profile. 127 154 IPR000048 GO:0005515
Gma06g00475 450 Coils Coil 176 196 - -
Gma06g00475 450 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 2 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00475 Gma-Chr6 4055860 4057924 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g00475 2 440 IQD Protein Family AT2G26180 58.108 7.10e-142 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00475 - - gmx:100782825 822.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00483 04 4306130 4308544 Gma06g00475 06 4055860 4057924 GST
Gma17g02176 17 39400123 39402777 Gma06g00475 06 4055860 4057924 PCT
Gma14g00880 14 9553099 9555653 Gma06g00475 06 4055860 4057924 PCT
Gma06g00475 06 4055860 4057924 Gma17g02176 17 39400123 39402777 PCT
Gma06g00475 06 4055860 4057924 Gma14g00880 14 9553099 9555653 PCT