Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00465 ATGCGAGGCATATTCTTAATTTGTCTCGTTGAGAATATGGGAATAGCAAGGAAATGTTCATATTGTGGTAACTTAGGTCACAATGCAAGGACTTGTAAAAGTACTCCCGGTCAAGGACAACTAAAGCTCTTCGGAGTGCAACTAGATGTTTCTTCTTCTTCATCATCCTCGAATTCTTTTTCATCATCATCACCTTCATATTCTGGCATGAAAAGAAGTTTTAGCACGAATTACTTGTTGTCTTCATGGGCATCTTCATCTGTACCCTCCTCCTTTTCCTCGCCTTCCCTGCTTGGTGCAAATGAAAATTCAGATAGTTACTTACTCAATGCCAATAGCCTCATATCAACAATTCAAGACACAAAAAAAGGTGTCCCGTGGACAGAGGAGGAGCATCggatatttcttatagggcttgagaagctggggaagggaaactggagaggcatatctaaaagttttgtgacaacaagaacacctacccaagtggctagtcatgcacaaaaatattttctccgtcaATCTCAGAATAGCTTCAATAAAAGAAAACACCGCCCTAGTCCCAACCTGTTCGATAATTGGCTTTCGCATCGTCCTCATTCATTGCTGAACTGGGTTACCACTTTAACTTCAACTAATAATTGCACTGTTCAGAGCGCGAGCCCAGATTTAGAACTCAAACTTGCAACTCCCACGCCATTGGAGCTATCAGTAGCAGATGCATAG 726 0.3457 MRGIFLICLVENMGIARKCSYCGNLGHNARTCKSTPGQGQLKLFGVQLDVSSSSSSSNSFSSSSPSYSGMKRSFSTNYLLSSWASSSVPSSFSSPSLLGANENSDSYLLNANSLISTIQDTKKGVPWTEEEHRIFLIGLEKLGKGNWRGISKSFVTTRTPTQVASHAQKYFLRQSQNSFNKRKHRPSPNLFDNWLSHRPHSLLNWVTTLTSTNNCTVQSASPDLELKLATPTPLELSVADA 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00465 241 SUPERFAMILY Homeodomain-like 121 175 IPR009057 -
Gma06g00465 241 CDD SANT 126 171 IPR001005 -
Gma06g00465 241 PANTHER TRANSCRIPTION FACTOR KUA1 16 197 - -
Gma06g00465 241 Gene3D - 127 176 - -
Gma06g00465 241 ProSiteProfiles Zinc finger CCHC-type profile. 17 34 IPR001878 GO:0003676|GO:0008270
Gma06g00465 241 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 16 197 - -
Gma06g00465 241 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 119 175 IPR017930 -
Gma06g00465 241 ProSiteProfiles Myb-like domain profile. 119 171 IPR001005 -
Gma06g00465 241 SMART sant 123 173 IPR001005 -
Gma06g00465 241 Pfam Myb-like DNA-binding domain 126 171 IPR001005 -
Gma06g00465 241 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 122 174 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00465 Gma-Chr6 3971098 3972401 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma06g00465 Myb_DNA-binding 4.6e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00465 - - gmx:100806176 445.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00465 06 3971098 3972401 Gma06g00465 06 3971098 3972401 ECH
Gma04g00471 04 4209190 4211207 Gma06g00465 06 3971098 3972401 ECH
Gma04g00471 04 4209190 4211207 Gma06g00465 06 3971098 3972401 GST